Pairwise Alignments

Query, 353 a.a., protease SohB from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., Periplasmic serine proteases (ClpP class) from Enterobacter asburiae PDN3

 Score =  378 bits (970), Expect = e-109
 Identities = 193/353 (54%), Positives = 261/353 (73%), Gaps = 5/353 (1%)

Query: 1   MEFLLDYGLFLAKIVTVVVALVAVLVIVKSLGGRSGGAKGELEITDLTEQHKETVERLEA 60
           ME L  YGLFLAKI TVVVA+  V V++ +L  R    +GEL IT L+EQ+KE  E +  
Sbjct: 1   MELLSQYGLFLAKIATVVVAIAVVAVLIVNLTQRKR-QRGELRITRLSEQYKEMQEEMSL 59

Query: 61  YLHDEAFLKARDKADKKKEKAEQKSREKSLKQAAKEGELESKRDPHLFVLDFHGSIDAKE 120
            L D    K   KA KKK K E K+     K  AK    + K  P ++V+DF GS+DA E
Sbjct: 60  ALLDSHQQKLWLKAQKKKHKQEAKAA----KAKAKLNAPQDKATPRVYVIDFKGSMDAHE 115

Query: 121 VASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLASSQLDRLKAAGLPLTIAVDKVA 180
           V+SLREEV+A+LAVA   D+V++RLE+ GG+VHGYGLA+SQL RL+   +PLT+AVDKVA
Sbjct: 116 VSSLREEVTAVLAVATPQDQVVVRLESPGGVVHGYGLATSQLQRLREKQIPLTVAVDKVA 175

Query: 181 ASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKNDIEFEQLTAGEYKRTLTMF 240
           ASGGYMMAC+ADKIV+APF+I+GSIGVVAQ+PNF++ LK  +I+ E  TAG+YKRTLT+ 
Sbjct: 176 ASGGYMMACVADKIVAAPFSIIGSIGVVAQIPNFNRFLKNKEIDIELHTAGQYKRTLTLL 235

Query: 241 GENTDKAREKFKQELEETHQLFKDFIREHRPALDLDKVATGEHWFGTQAKALGLVDEIQT 300
           GENT++ R+KF+++L ETH LFKDF+   RP LD+++VATGEHW+G QA+  GLVDE+ T
Sbjct: 236 GENTEEGRQKFREDLNETHHLFKDFVHRMRPTLDIEQVATGEHWYGVQAQEKGLVDEVGT 295

Query: 301 SDDLIVAACKSKTVLLLRYTQKKKLADKLAGVAGDAADNVLLKLISRGQRPLV 353
           SDDL++   + + ++ +R+TQ+K+L D+    A ++AD +LL+ + RGQ+PL+
Sbjct: 296 SDDLLLNLMEGRELVGVRFTQRKRLLDRFTNSAAESADRLLLRWLQRGQKPLL 348