Pairwise Alignments

Query, 353 a.a., protease SohB from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., capsid assembly protein from Escherichia coli ECRC98

 Score = 53.5 bits (127), Expect = 1e-11
 Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 4/169 (2%)

Query: 139 DEVLLRLETGGGMVHGYGLASSQLDRLKAAGLPLTIAVDKVAASGGYMMACIADKIVSAP 198
           D +LL ++T GGMV G    +  + R++    P+    + +  S G ++A  A + +   
Sbjct: 124 DGILLDMDTPGGMVAGAFDCADIIARVRDIK-PVWALANDMNCSAGQLLASAASRRLVTQ 182

Query: 199 FAIVGSIGVVAQLPNFHKLLKKNDIEFEQLTAGEYKRTLTMFGENTDKAREKFKQELEET 258
            A  GSIGV+    N+   L+K  +E   + +G +K     +       RE  +  ++ T
Sbjct: 183 TARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPGDVRETLQSRMDAT 242

Query: 259 HQLFKDFIREHRPALDLDKVATGEH--WFGTQAKALGLVDEIQTSDDLI 305
            ++F   +  +   L +  V   E   + G +A   GL DE+  S D I
Sbjct: 243 RRMFAQKVSAY-TGLSVQAVLDTEAAVYSGQEAIDAGLADELVNSTDAI 290