Pairwise Alignments

Query, 692 a.a., DNA polymerase III subunit gamma/tau from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., DNA polymerase III subunit gamma/tau from Rhodanobacter sp000427505 FW510-R12

 Score =  415 bits (1066), Expect = e-120
 Identities = 235/534 (44%), Positives = 325/534 (60%), Gaps = 19/534 (3%)

Query: 1   MSYLALARKWRPTRFSEVVGQSHVLTALENALAQNRLHHAYLFSGTRGVGKTTIGRLFAK 60
           MSY  LARKWRP +F+E+VGQ HV+ AL NAL   R+HHAYLF+GTRGVGKTTI R+FAK
Sbjct: 1   MSYQVLARKWRPRKFAELVGQEHVVRALTNALDTGRMHHAYLFTGTRGVGKTTIARIFAK 60

Query: 61  GLNCETGITATPCGQCATCQEIDQGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF 120
            LNCE G +A PCG+CA C  +D+GRFVDLLEIDAAS T V+D RE+++N QY P+RGRF
Sbjct: 61  SLNCERGQSADPCGECAVCTAVDEGRFVDLLEIDAASNTGVDDVREVIENAQYAPSRGRF 120

Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISV 180
           KVYL+DEVHMLS+++FNALLKTLEEPP +VKFLLATTDPQKLPVT+LSRCL+F+LK +  
Sbjct: 121 KVYLVDEVHMLSKNAFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLKFNLKRLLP 180

Query: 181 ENIQQQLDKVLHAEQISSDSKALNLLAHAADGSMRDALSLTDQAIALGNGVVKSDIVAHM 240
           E I  Q+  +L AE IS +  A+  LA AADGS+RD LSL DQAIA G G + ++ V +M
Sbjct: 181 EQISGQMRHILGAENISYEDGAIGELARAADGSLRDGLSLLDQAIAYGGGALHAEDVRNM 240

Query: 241 LGTLDTDHSLHLLQAISLQTPQAVMDCIETLAQNGVEWDGLLQQLSTQLHRIAMYQALPA 300
           LG++     + +L A++    + ++     +A    ++ G+L  +++ LHR+ + Q +P 
Sbjct: 241 LGSVARGQVIGVLDALAAGDGERLLAECTRIASYSPDFGGVLDDIASVLHRLQLIQLIPG 300

Query: 301 -TLDKSLPEASRIESLAKTLAPQDVQLYYQIALKGRQDLPLSPTARIGIEMLMLRMMAFR 359
              +    +   + +LA+ + P+DVQLYYQIA  GR+DL L+P AR G EM MLRM+AFR
Sbjct: 301 YRPEDDSDDDGVLMALAERMTPEDVQLYYQIATSGRRDLALAPDARTGFEMAMLRMLAFR 360

Query: 360 PSHVSLASVIVPPNTAVTAPTIAAPTSQMAAAAPQPQPVAQSNVSQSASQAMPHPVAPPM 419
           P      + +     A  +   AAP  + A+AAP   P   +  +++     P P   P 
Sbjct: 361 PGD---GAPVARAERAAASGQPAAP--RPASAAPARTPPIPTRAAEAPMPRTPAPTPAPA 415

Query: 420 MAAQPVVESAVPVTQREA---SHSINAPEASVVTNTDTQSQASMPALAGLR--------- 467
           +AA PV   A  +   E+      +  P + +  N   + +     +  LR         
Sbjct: 416 VAA-PVARDADGLPDWESLIERAGLRGPFSVLAQNAILRERDGQTLVLALRPAHMSMAVE 474

Query: 468 HQLRSKRQEVQNKGADGKKSDATSATPASALERIAQRAQQVQVSPERNDEDELE 521
             +    + + N   +  K    S   A+  +  A RA Q + S +   E  +E
Sbjct: 475 PMVSQMEERIGNALGERIKLRFVSQNQATGAQTPAARAAQARDSAQAAAEQAIE 528



 Score = 53.1 bits (126), Expect = 3e-11
 Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 4/138 (2%)

Query: 558 PEMGAKLIEEAVAQDAWSALVQRLETAKMVEQLALNSAF-VRQGDQISLTLRPSHAHLHN 616
           P + A +  +A     W +L++R         LA N+    R G  + L LRP+H  +  
Sbjct: 414 PAVAAPVARDADGLPDWESLIERAGLRGPFSVLAQNAILRERDGQTLVLALRPAHMSMAV 473

Query: 617 EKAQQELEQALNHVLGEACSLNITVGQE---GETPLELRERLYQQKLTSALHSLQTDPNV 673
           E    ++E+ + + LGE   L      +    +TP     +       +A  +++ DP V
Sbjct: 474 EPMVSQMEERIGNALGERIKLRFVSQNQATGAQTPAARAAQARDSAQAAAEQAIEGDPLV 533

Query: 674 QFIERRFNAQLDSDSVRP 691
           Q ++R F A++   S++P
Sbjct: 534 QSLKREFGARVVPQSIKP 551