Pairwise Alignments

Query, 692 a.a., DNA polymerase III subunit gamma/tau from Vibrio cholerae E7946 ATCC 55056

Subject, 619 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  248 bits (634), Expect = 5e-70
 Identities = 149/432 (34%), Positives = 243/432 (56%), Gaps = 21/432 (4%)

Query: 2   SYLALARKWRPTRFSEVVGQSHVLTALENALAQNRLHHAYLFSGTRGVGKTTIGRLFAKG 61
           +Y  LARK+RP  F++++GQ  ++  L NA +  R+  AY+ +G RGVGKTT  R+ A+ 
Sbjct: 38  AYRVLARKYRPQNFADLIGQEAMVRTLRNAFSSGRIAQAYILTGVRGVGKTTTARILARA 97

Query: 62  LNCET--GITATPCGQCAT----CQEIDQGRFVDLLEIDAASRTKVEDTRELLDNVQYKP 115
           LN E   G    P    A     C++I + R VD++E+DAAS T + D RE++++ +Y+P
Sbjct: 98  LNYEPADGAAGGPSLDLAVMGKHCRDIIESRHVDVMEMDAASNTSINDIREIIESARYRP 157

Query: 116 ARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHL 175
              R+KVY+IDEVHMLS  +FN LLKTLEEPPE+VKF+ ATT+ +K+PVT+LSRC +F L
Sbjct: 158 VMARYKVYIIDEVHMLSTAAFNGLLKTLEEPPEHVKFIFATTEIRKVPVTVLSRCQRFDL 217

Query: 176 KPISVENIQQQLDKVLHAEQISSDSKALNLLAHAADGSMRDALSLTDQAIALGNGVVKSD 235
           + +    +   L  +   E ++ + +AL+++A AA+GS+RD+LSL DQAIA G G V +D
Sbjct: 218 RRVEAGTLAAHLSGICAREGVTIEPEALSIVARAAEGSVRDSLSLLDQAIAHGGGTVSAD 277

Query: 236 IVAHMLGTLDTDHSLHLLQAISLQTPQAVMDCIETLAQNGVEWDGLLQQLSTQLHRIAMY 295
            V  +LG  D    + L +A+        +        +G +   +L  L+   H +   
Sbjct: 278 EVRRLLGLADKGRVIDLFEALMKGEIARALAEFRDQYDSGADPAVILTDLADFTHLVTRL 337

Query: 296 QALP-ATLDKSLPEASRI--ESLAKTLAPQDVQLYYQIALKGRQDLPLSPTARIGIEMLM 352
           + +P A  D +L EA R+    +A+ L+ + +   +Q+  KG  ++  +P      EM++
Sbjct: 338 KIVPDAAEDAALVEAERVRGSEMAQGLSMRVLARAWQMLSKGIGEVQQAPKPAQAAEMVL 397

Query: 353 LRM--MAFRPSHVSLASVI---VPPNTAVTAPTI-------AAPTSQMAAAAPQPQPVAQ 400
           +R+   A  P+       +     P+ + +AP++         P   +A    + +P  +
Sbjct: 398 VRLAYAADLPTPDDALRRLKDQPAPSASPSAPSLPSGGGGGGGPRLSLAPRPAEARPQPR 457

Query: 401 SNVSQSASQAMP 412
           +++   A  AMP
Sbjct: 458 ADIRVDARAAMP 469