Pairwise Alignments

Query, 692 a.a., DNA polymerase III subunit gamma/tau from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., DNA polymerase III subunits gamma and tau (EC 2.7.7.7) from Sphingobium sp. HT1-2

 Score =  270 bits (689), Expect = 2e-76
 Identities = 177/504 (35%), Positives = 268/504 (53%), Gaps = 30/504 (5%)

Query: 3   YLALARKWRPTRFSEVVGQSHVLTALENALAQNRLHHAYLFSGTRGVGKTTIGRLFAKGL 62
           Y  LARK+RP  F E++GQ  ++  L NA+ + RL HA+L +G RGVGKT+  RL AK L
Sbjct: 8   YRVLARKYRPRNFRELIGQDAMVQTLGNAIRRGRLAHAFLMTGVRGVGKTSTARLIAKAL 67

Query: 63  NC-----ETGITATPCGQCATCQEIDQGRFVDLLEIDAASRTKVEDTRELLDNVQYKPAR 117
           NC     + G T  PCG C  C  I +GR +D++E+DAAS T V+D RE+++ V+Y    
Sbjct: 68  NCIGPDGQGGPTIDPCGVCEPCMAIAEGRHIDVVEMDAASHTGVDDVREIIEAVRYAAVS 127

Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKP 177
            R+K+Y+IDEVHMLS+++FNALLKTLEEPP +VKFL ATT+  K+PVT+LSRC +F L+ 
Sbjct: 128 ARYKIYIIDEVHMLSKNAFNALLKTLEEPPAHVKFLFATTEVNKVPVTVLSRCQRFDLRR 187

Query: 178 ISVENIQQQLDKVLHAEQISSDSKALNLLAHAADGSMRDALSLTDQAIA---LGNG--VV 232
           I  E +      V+ AE+++++  AL+L+A AA+GS RD LS+ DQAIA   +G G  +V
Sbjct: 188 IPAEMLAGHFAHVVEAEKVAAEPDALSLIAQAAEGSARDGLSILDQAIAHAEMGEGEPMV 247

Query: 233 KSDIVAHMLGTLDTDHSLHLLQAISLQTPQAVMDCIETLAQNGVEWDGLLQQLSTQLHRI 292
            +  V  MLG  D   +  LL  +      A++  +      GVE   L++ L   +H +
Sbjct: 248 TAAQVREMLGLSDRGSTRRLLGLLLEGDTAALLGGVRDQYALGVEPLSLMRGLLELVHAV 307

Query: 293 AMYQALP--ATLDKSLPEASRIESLAKTLAPQDVQLYYQIALKGRQDLPLSPTARIGIEM 350
            + +A    AT  +S  E   +   A  +    +   +Q+ LKG  ++  +       EM
Sbjct: 308 TLVKAGRDIATPGQSDEERGALADWASQIGFGPLHRLWQLMLKGHDEVATAALPIEACEM 367

Query: 351 LMLRMM--AFRPSHVSLASVIVPPNTAVTAPTIAAPTSQMAAAAPQPQ---PVAQSNVSQ 405
            +LR+M  A  P    LA ++        AP +    S  AA AP+P    P    ++ +
Sbjct: 368 ALLRVMHAATMPDPSDLARML-QGGVPTAAPAMLGQASAAAAPAPEPASSLPATFEDLIE 426

Query: 406 SASQAMPHPVAPPMMAAQPVVESAVPVTQREASHSINAPEASVV------------TNTD 453
           +  Q     +A  M     ++    P+ +   + S++   A+ +            T T 
Sbjct: 427 AFWQKSKGHLAQEMHDCVGIIRYDPPMLEYRGTASLSPDFATRIIPALREVTGVAWTVTQ 486

Query: 454 TQSQASMPALAGLRHQLRSKRQEV 477
            + +A    LA  + QL   R  +
Sbjct: 487 GEGEAKPTLLANEQRQLADSRAAI 510