Pairwise Alignments

Query, 692 a.a., DNA polymerase III subunit gamma/tau from Vibrio cholerae E7946 ATCC 55056

Subject, 596 a.a., DNA polymerase III subunit gamma/tau from Magnetospirillum magneticum AMB-1

 Score =  276 bits (705), Expect = 3e-78
 Identities = 162/390 (41%), Positives = 227/390 (58%), Gaps = 13/390 (3%)

Query: 3   YLALARKWRPTRFSEVVGQSHVLTALENALAQNRLHHAYLFSGTRGVGKTTIGRLFAKGL 62
           Y  LARK+RPT F+ ++GQ  ++  L NA+   RL HA++ +G RGVGKTT  R+ A+ L
Sbjct: 10  YRVLARKYRPTDFAGLIGQEAMVRTLSNAIKTGRLAHAFVLTGVRGVGKTTTARIIARAL 69

Query: 63  NC-----ETGITATPCGQCATCQEIDQGRFVDLLEIDAASRTKVEDTRELLDNVQYKPAR 117
           NC     + G T  PCGQC  C+ I + R VD+LE+DAASRT V D RE+++ V+Y+P  
Sbjct: 70  NCVGLDGKGGPTIDPCGQCEHCRAIAEDRHVDILEMDAASRTGVNDIREIIEGVRYRPTS 129

Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKP 177
            RFK+Y+IDEVHMLS  +FNALLKTLEEPPE+VKF+ ATT+ +K+PVT+LSRC +F L+ 
Sbjct: 130 ARFKIYIIDEVHMLSTAAFNALLKTLEEPPEHVKFVFATTEIRKIPVTVLSRCQRFDLRR 189

Query: 178 ISVENIQQQLDKVLHAEQISSDSKALNLLAHAADGSMRDALSLTDQAIALGNGVVKSDIV 237
           + +E + +  + +   EQ   +  AL L+A AADGS+RD LSL DQAI+ G G V    V
Sbjct: 190 VEMEVLAKHFESIAAKEQAEIEPAALKLIARAADGSVRDGLSLLDQAISHGAGAVTEAQV 249

Query: 238 AHMLGTLDTDHSLHLLQAISLQTPQAVMDCIETLAQNGVEWDGLLQQLSTQLHRIAMYQA 297
             MLG  D      LL AI      A +D I      G +   +LQ +   +H +   + 
Sbjct: 250 RDMLGLADRARVFDLLDAIMKGQVPAALDQITDQYAAGADPVVVLQDMLELVHWLTRLKV 309

Query: 298 LPATLDK-SLPEASRIE--SLAKTLAPQDVQLYYQIALKGRQDLPLSPTARIGIEMLMLR 354
            P   D+    E  R++   ++KTL+   +   +Q+ LKG  +   +P      EM ++R
Sbjct: 310 TPDAADQLGASETERVKGAEMSKTLSLAALTRAWQMLLKGLGETRNAPNPLQAAEMAVVR 369

Query: 355 M--MAFRPSHVSLASVI---VPPNTAVTAP 379
           +   A  PS   L   +    PP  A   P
Sbjct: 370 LAYAAELPSPAELVEQLRANPPPPPAPRGP 399