Pairwise Alignments

Query, 692 a.a., DNA polymerase III subunit gamma/tau from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., DNA polymerase III subunits gamma and tau (NCBI) from Escherichia coli BW25113

 Score =  612 bits (1577), Expect = e-179
 Identities = 349/697 (50%), Positives = 444/697 (63%), Gaps = 59/697 (8%)

Query: 1   MSYLALARKWRPTRFSEVVGQSHVLTALENALAQNRLHHAYLFSGTRGVGKTTIGRLFAK 60
           MSY  LARKWRP  F++VVGQ HVLTAL N L+  R+HHAYLFSGTRGVGKT+I RL AK
Sbjct: 1   MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60

Query: 61  GLNCETGITATPCGQCATCQEIDQGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF 120
           GLNCETGITATPCG C  C+EI+QGRFVDL+EIDAASRTKVEDTR+LLDNVQY PARGRF
Sbjct: 61  GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120

Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISV 180
           KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLPVTILSRCLQFHLK + V
Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180

Query: 181 ENIQQQLDKVLHAEQISSDSKALNLLAHAADGSMRDALSLTDQAIALGNGVVKSDIVAHM 240
           E I+ QL+ +L+ E I+ + +AL LLA AA+GS+RDALSLTDQAIA G+G V +  V+ M
Sbjct: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240

Query: 241 LGTLDTDHSLHLLQAISLQTPQAVMDCIETLAQNGVEWDGLLQQLSTQLHRIAMYQALPA 300
           LGTLD D +L L++A+     + VM  I   A  G+EW+ LL ++   LHRIAM Q  PA
Sbjct: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300

Query: 301 TLDKSLPEAS-RIESLAKTLAPQDVQLYYQIALKGRQDLPLSPTARIGIEMLMLRMMAFR 359
            L   +     R+  LA+T+ P D+QLYYQ  L GR++LP +P  R+G+EM +LR +AF 
Sbjct: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360

Query: 360 PSHVSLASVIVPPNTAVTAPTIAAPTSQMAAAAPQPQPVAQSNVSQSASQAMPHPVAPPM 419
           P  + L    VP  +   AP   APT+ M      PQP       QSA Q  P       
Sbjct: 361 P-RMPLPEPEVPRQS--FAP--VAPTAVMTPTQVPPQP-------QSAPQQAP------- 401

Query: 420 MAAQPVVESAVPVTQREASHSINAPEASVVTNTDTQSQASMPALAGLRHQLRSKRQEVQN 479
                     VP+ +                 T +Q  A+   L  ++   ++K+ E   
Sbjct: 402 ---------TVPLPE-----------------TTSQVLAARQQLQRVQGATKAKKSE--- 432

Query: 480 KGADGKKSDATSATPA--SALERIAQRAQQVQVSPERNDEDELEPEEEIYQWRPMQPIEV 537
                  + AT A P   +ALER+A    +VQ  P  +  ++   ++E Y+W+   P+  
Sbjct: 433 ------PAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQ 486

Query: 538 AVKSEVTPTQLKKALEHEKTPEMGAKLIEEAVAQDAWSALVQRLETAKMVEQLALNSAFV 597
             +   TP  LKKALEHEKTPE+ AKL  EA+ +D W+A V +L   K+VEQ+ALN+   
Sbjct: 487 QKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKE 546

Query: 598 RQGDQISLTLRPSHAHLHNEKAQQELEQALNHVLGEACSLNITVGQEG--ETPLELRERL 655
              + + L LR S  HL+N  AQQ+L +AL+ + G    L I         TPLE R+ +
Sbjct: 547 ESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAI 606

Query: 656 YQQKLTSALHSLQTDPNVQFIERRFNAQLDSDSVRPI 692
           Y++KL  A  S+  D N+Q + R F+A+LD +S+RPI
Sbjct: 607 YEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643