Pairwise Alignments

Query, 692 a.a., DNA polymerase III subunit gamma/tau from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., DNA polymerase III subunit gamma/tau from Erwinia tracheiphila SCR3

 Score =  582 bits (1500), Expect = e-170
 Identities = 338/699 (48%), Positives = 432/699 (61%), Gaps = 60/699 (8%)

Query: 1   MSYLALARKWRPTRFSEVVGQSHVLTALENALAQNRLHHAYLFSGTRGVGKTTIGRLFAK 60
           MSY  LARKWRP  F++VVGQ HVLTAL N L+  R+HHAYLFSGTRGVGKTTI RL AK
Sbjct: 1   MSYQVLARKWRPQAFTDVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTTIARLLAK 60

Query: 61  GLNCETGITATPCGQCATCQEIDQGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF 120
           GLNCETGITATPCGQC  C+EI+QGRFVDL+EIDAASRTKVEDTR+LLDNVQY PARGRF
Sbjct: 61  GLNCETGITATPCGQCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120

Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISV 180
           KVYLIDEVHMLSRHSFNALLKTLEEPP++VKFLLATTDPQKLPVTILSRCLQFHLK +  
Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPDHVKFLLATTDPQKLPVTILSRCLQFHLKALDA 180

Query: 181 ENIQQQLDKVLHAEQISSDSKALNLLAHAADGSMRDALSLTDQAIALGNGVVKSDIVAHM 240
             I+ QL+ VL  E IS++ +AL LLA  ADGSMRDALSLTDQAIA+G G V +  V  M
Sbjct: 181 VQIRGQLEYVLQQENISAEVRALQLLARTADGSMRDALSLTDQAIAIGAGQVTTATVIDM 240

Query: 241 LGTLDTDHSLHLLQAISLQTPQAVMDCIETLAQNGVEWDGLLQQLSTQLHRIAMYQALPA 300
           LGTLD +  L L++A+     + VM  +   A  GVEW+ LL ++ T LHR+AM Q + +
Sbjct: 241 LGTLDDEQPLALIEALVRAEGEKVMSLLNQAASRGVEWEALLVEMLTLLHRVAMIQLVSS 300

Query: 301 TLDKSLPEA-SRIESLAKTLAPQDVQLYYQIALKGRQDLPLSPTARIGIEMLMLRMMAFR 359
             D     A SR+  LA+ L P +VQLYYQ  L GR++LPL+P  R+G+EM +LR +AF 
Sbjct: 301 APDDEFAAAGSRLRELARVLPPAEVQLYYQTLLVGRKELPLAPDRRMGVEMTLLRALAFH 360

Query: 360 PSHVSLASVIVPPNTAVTAPTIAAPTSQMAAAAPQPQPVAQSNVSQSASQAMPHPVAPPM 419
           P  +                              +P P A + VS+      P P     
Sbjct: 361 PKQL----------------------------IAEPSPSAANIVSERPIPRQPEPGTETP 392

Query: 420 MAAQPVVESAVPVTQREASHSINAPEASVVTNTDTQSQASMPALAGLRHQLRSKRQEVQN 479
           +A   V  +AV   Q E   S+           DT SQ        L+ + +  RQ+   
Sbjct: 393 LAVTAVTPAAV---QSEPVGSL----------PDTTSQL-------LQARTQLMRQQGVT 432

Query: 480 KGADGKKSDATSATPASALERIA---QRAQQVQVSPERNDEDELEP-EEEIYQWRPMQPI 535
           K    + +   S +   ALER+A   +R ++ Q +PE       EP ++E+Y+W+     
Sbjct: 433 KPKKSEPAAQGSQSAGLALERLAAVGERGRKRQTTPE-----PAEPVKKEVYRWKSQSAE 487

Query: 536 EVAVKSEVTPTQLKKALEHEKTPEMGAKLIEEAVAQDAWSALVQRLETAKMVEQLALNSA 595
                   TP  L+ ALEHEKTPE+  KL  E+  +DAW+  +  L   K+V+QLALN+ 
Sbjct: 488 AEPEGVIATPKLLRTALEHEKTPELINKLATESELRDAWAGEIATLTLPKLVQQLALNAW 547

Query: 596 FVRQGDQISLTLRPSHAHLHNEKAQQELEQALNHVLGEACSLNITVGQEGE--TPLELRE 653
                  I L LR S  HL++  AQ+ L +AL+ + G    L +         TPLE R+
Sbjct: 548 KETLESGIVLHLRSSQRHLNSPSAQKVLREALSQLAGHPVELTLIEDDNPAVLTPLEWRQ 607

Query: 654 RLYQQKLTSALHSLQTDPNVQFIERRFNAQLDSDSVRPI 692
           ++Y++KL  A  S+ TD ++Q + + F+A +D +S+RPI
Sbjct: 608 KIYEEKLAQARQSITTDSHIQTLRQFFDADVDEESIRPI 646