Pairwise Alignments

Query, 692 a.a., DNA polymerase III subunit gamma/tau from Vibrio cholerae E7946 ATCC 55056

Subject, 642 a.a., DNA polymerase III, subunit gamma and tau from Enterobacter asburiae PDN3

 Score =  612 bits (1577), Expect = e-179
 Identities = 343/697 (49%), Positives = 445/697 (63%), Gaps = 60/697 (8%)

Query: 1   MSYLALARKWRPTRFSEVVGQSHVLTALENALAQNRLHHAYLFSGTRGVGKTTIGRLFAK 60
           MSY  LARKWRP  F++VVGQ HVLTAL N L+  R+HHAYLFSGTRGVGKT+I RL AK
Sbjct: 1   MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60

Query: 61  GLNCETGITATPCGQCATCQEIDQGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF 120
           GLNCETGITATPCG C  C+EI+QGRFVDL+EIDAASRTKVEDTR+LLDNVQY PARGRF
Sbjct: 61  GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120

Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISV 180
           KVYLIDEVHMLSRHSFNALLKTLEEPP +VKFLLATTDPQKLPVTILSRCLQFHLK + V
Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180

Query: 181 ENIQQQLDKVLHAEQISSDSKALNLLAHAADGSMRDALSLTDQAIALGNGVVKSDIVAHM 240
           E I+ QL+ +L  E+I  + +AL LLA AADGS+RDALSLTDQAIA G+G + ++ V+ M
Sbjct: 181 EQIRAQLEHILDEEKIVHEPRALQLLARAADGSLRDALSLTDQAIASGDGKLSAEAVSTM 240

Query: 241 LGTLDTDHSLHLLQAISLQTPQAVMDCIETLAQNGVEWDGLLQQLSTQLHRIAMYQALPA 300
           LGTLD D +L L++A+     + VM  +   A  G+EW+GLL ++ + LHR+AM Q  P+
Sbjct: 241 LGTLDDDQALSLIEAMIAANGERVMSQVNAAAARGIEWEGLLVEMLSLLHRVAMLQLSPS 300

Query: 301 TLDKSLPE-ASRIESLAKTLAPQDVQLYYQIALKGRQDLPLSPTARIGIEMLMLRMMAFR 359
            +   +     R+  LA+T+ P DVQLYYQ  L GR++LP +P  R+G+EM +LR +AF 
Sbjct: 301 AIGADMAAIEQRMRELARTVPPADVQLYYQTLLIGRKELPFAPDPRMGVEMTLLRALAFH 360

Query: 360 PSHVSLASVIVPPNTAVTAPTIAAPTSQMAAAAPQPQPVAQSNVSQSASQAMPHPVAPPM 419
           P               +  P   AP    A  AP            S  Q  P P  PP 
Sbjct: 361 P--------------RMPLPEPEAPRQSFAPVAP--------TAVMSPQQVPPQPTPPP- 397

Query: 420 MAAQPVVESAVPVTQREASHSINAPEASVV-TNTDTQSQASMPALAGLRHQLRSKRQEVQ 478
                  +  VP++  +A+ S+ A  + +      T+ + S PA  G       + + V 
Sbjct: 398 -------QQNVPLS--DATSSVLAARSQLQRAQGVTKPKKSEPAAPG-------RARPVN 441

Query: 479 NKGADGKKSDATSATPASALERIAQRAQQVQVSPERNDEDELEP-EEEIYQWRPMQPIEV 537
           N                +ALER+A   ++VQ  P  +  ++  P +EE Y+W+     E 
Sbjct: 442 N----------------AALERLASVTERVQSRPAPSALEQKAPVKEEAYRWKATTITEE 485

Query: 538 AVKSEVTPTQLKKALEHEKTPEMGAKLIEEAVAQDAWSALVQRLETAKMVEQLALNSAFV 597
             +   TP  LKKALEHEKTPE+ AKL EE++ +DAW+A V +L+  K+VEQ+ALN+   
Sbjct: 486 VKEEVATPKALKKALEHEKTPELSAKLAEESIVRDAWAAEVSKLQLPKLVEQVALNAWKE 545

Query: 598 RQGDQISLTLRPSHAHLHNEKAQQELEQALNHVLGEACSLNITVGQEG--ETPLELRERL 655
           + G+Q+ L LRP   HL++  AQ+ L +AL  + G    L I        +TPLE R+ +
Sbjct: 546 QDGNQVRLHLRPGQRHLNSPGAQKALAEALTALQGAPVELTIIEDDNPAVKTPLEWRQAI 605

Query: 656 YQQKLTSALHSLQTDPNVQFIERRFNAQLDSDSVRPI 692
           Y++KL  A  ++  D N+Q + R F+A LD +S+RPI
Sbjct: 606 YEEKLAQAREAIIADNNIQTLRRFFDADLDEESIRPI 642