Pairwise Alignments

Query, 692 a.a., DNA polymerase III subunit gamma/tau from Vibrio cholerae E7946 ATCC 55056

Subject, 670 a.a., DNA polymerase III subunit gamma/tau from Dickeya dianthicola ME23

 Score =  613 bits (1580), Expect = e-179
 Identities = 357/702 (50%), Positives = 455/702 (64%), Gaps = 42/702 (5%)

Query: 1   MSYLALARKWRPTRFSEVVGQSHVLTALENALAQNRLHHAYLFSGTRGVGKTTIGRLFAK 60
           MSY  LARKWRP  F++VVGQ HVLTAL N L+  R+HHAYLFSGTRGVGKTTI RL AK
Sbjct: 1   MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTTIARLLAK 60

Query: 61  GLNCETGITATPCGQCATCQEIDQGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF 120
           GLNCETGITATPCGQC TC+EI+QGRFVDL+EIDAASRTKVEDTR+LLDNVQY PARGRF
Sbjct: 61  GLNCETGITATPCGQCDTCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120

Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISV 180
           KVYLIDEVHMLSRHSFNALLKTLEEPP +VKFLLATTDPQKLPVTILSRCLQFHLK +  
Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFHLKALDA 180

Query: 181 ENIQQQLDKVLHAEQISSDSKALNLLAHAADGSMRDALSLTDQAIALGNGVVKSDIVAHM 240
           E I++ L +VL  EQ++++ +AL LLA AADGS+RDALSLTDQAIA+G G V +  V+ M
Sbjct: 181 EQIRRHLQQVLEQEQLAAEPRALQLLARAADGSLRDALSLTDQAIAMGQGQVTAAAVSQM 240

Query: 241 LGTLDTDHSLHLLQAISLQTPQAVMDCIETLAQNGVEWDGLLQQLSTQLHRIAMYQALPA 300
           LGTLD +  L L++A+       VM  +   A  GV+W+ LL +  T LHRIAM Q LP+
Sbjct: 241 LGTLDDEQPLALIEALVKGDGAGVMALMGQAAARGVDWEALLVETLTLLHRIAMLQLLPS 300

Query: 301 TL-DKSLPEASRIESLAKTLAPQDVQLYYQIALKGRQDLPLSPTARIGIEMLMLRMMAFR 359
            L D+    A R+  LA+ + P +VQLYYQ  L GR++LP +P  R+G+EM +LR +AF 
Sbjct: 301 ALGDEYNQVAPRLRELARVIPPAEVQLYYQTLLVGRKELPYAPERRMGVEMTLLRALAFH 360

Query: 360 PSHVSLASVIVPPNTAVTAPTIAAPTSQMAAAAPQPQPVAQSNVSQSASQAMPHPVAPPM 419
           PS            T      ++AP++  AA A  P P   S V  S       P A P+
Sbjct: 361 PS-----------QTIAEPVPVSAPSAVPAAGA--PLPADPSRVPPSV-----RPSAMPV 402

Query: 420 MAAQPVVESAVPVTQREASHSINAPEASVVTNTDTQSQASMPALAGLRHQLRSKRQEVQN 479
           ++    +   VP T  E   +  AP++++   T    QA        R QL +++     
Sbjct: 403 VSGDEALSRHVPATGSEPP-AAPAPDSNLPDATAQLLQA--------RSQLLNRQGNTPT 453

Query: 480 KGADGKKSDATSATPA-SALERIA---QRAQQVQVSPERNDEDELEPEEEIYQWRPMQPI 535
           K A+   S    A P  SALER+A   +R QQ   +     E+  + ++E Y+WR  +  
Sbjct: 454 KKAEPAASG--KARPVNSALERLASVTERGQQQMAAKAVAQEE--QKKQEAYRWRAQKKA 509

Query: 536 E-VAVKSEVTPTQLKKALEHEKTPEMGAKLIEEAVAQDAWSALVQRLETAKMVEQLALNS 594
           E V      TP  L+ ALE+EKTPE+ A+L EEA+ +DAW+A + RL   K+V+QLALN 
Sbjct: 510 EQVETAPVTTPKALRSALEYEKTPELAAQLAEEAIERDAWAAEIDRLTLPKLVQQLALN- 568

Query: 595 AFVRQGDQ--ISLTLRPSHAHLHNEKAQQELEQALNHVLGEACSLNITVGQEG--ETPLE 650
           AF    ++  I L LR S  HL++  AQ+ L +AL    G   SL +T        TPLE
Sbjct: 569 AFKEMPEEGVIHLHLRTSQRHLNSAAAQKMLSEALAAHYGRPISLTVTEDDTPAVRTPLE 628

Query: 651 LRERLYQQKLTSALHSLQTDPNVQFIERRFNAQLDSDSVRPI 692
            R+ +Y++KL  A  S+  D N+Q + R F+A+LD +S+RP+
Sbjct: 629 WRQAIYEEKLAQARQSIMADNNIQTLRRFFDAELDEESIRPV 670