Pairwise Alignments

Query, 692 a.a., DNA polymerase III subunit gamma/tau from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Azospirillum sp. SherDot2

 Score =  282 bits (721), Expect = 4e-80
 Identities = 151/362 (41%), Positives = 222/362 (61%), Gaps = 8/362 (2%)

Query: 2   SYLALARKWRPTRFSEVVGQSHVLTALENALAQNRLHHAYLFSGTRGVGKTTIGRLFAKG 61
           +Y  LARK+RP  F E++GQ  ++  L NA+   R+  A++ +G RGVGKTT  R+ A+ 
Sbjct: 19  AYRVLARKYRPKTFDELIGQDALVRTLTNAIQSGRIAQAFMLTGVRGVGKTTTARIIARA 78

Query: 62  LNCET-----GITATPCGQCATCQEIDQGRFVDLLEIDAASRTKVEDTRELLDNVQYKPA 116
           LNC       G T +PCG C  C+ I + R VD++E+DAAS T V+D RE++D V+Y P 
Sbjct: 79  LNCTGPDGTGGPTVSPCGVCDNCRAIAEDRHVDVMEMDAASHTGVDDIREIIDGVRYSPV 138

Query: 117 RGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLK 176
             R+K+Y+IDEVHMLS+ +FNALLKTLEEPP +VKF+ ATT+ +K+PVT+LSRC +F L+
Sbjct: 139 SARYKLYIIDEVHMLSKSAFNALLKTLEEPPSHVKFVFATTEIRKVPVTVLSRCQRFDLR 198

Query: 177 PISVENIQQQLDKVLHAEQISSDSKALNLLAHAADGSMRDALSLTDQAIALGNGVVKSDI 236
            +  + +++   +V   E    +  A +L+A AADGS+RD LSL DQAIAL  G V +  
Sbjct: 199 RVDAQVLKEHFTRVTAMEGAGIEGDATSLIARAADGSVRDGLSLLDQAIALAAGTVTAQQ 258

Query: 237 VAHMLGTLDTDHSLHLLQAISLQTPQAVMDCIETLAQNGVEWDGLLQQLSTQLHRIAMYQ 296
           V  MLG  D    + L +A     P   MD +  L + G +   +LQ L   +H +   +
Sbjct: 259 VRDMLGLADRTRVIDLFEAAVSAKPAEAMDILADLHRVGADPVVILQDLLDLVHNLTRLK 318

Query: 297 ALP-ATLDKSLPEASRIE--SLAKTLAPQDVQLYYQIALKGRQDLPLSPTARIGIEMLML 353
            +P +  D SLPEA R    SL+  L    +   +Q+ LKG  ++  +P  +  +EM+++
Sbjct: 319 VVPDSANDPSLPEAERTRGASLSSKLGMPALTRAWQLLLKGLNEVQAAPVPQQALEMVIV 378

Query: 354 RM 355
           R+
Sbjct: 379 RL 380