Pairwise Alignments

Query, 368 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score =  114 bits (285), Expect = 5e-30
 Identities = 82/287 (28%), Positives = 143/287 (49%), Gaps = 10/287 (3%)

Query: 20  QITAAKLILLVDDDPVFRRMTKGYLQKYGYQVIEAENGLDGLRKLRDHEPDLILCDLSMP 79
           Q T+A L L++DDD V R     YL+  G+ V++A NG  GL+     +PDL++CDL MP
Sbjct: 2   QKTSATL-LIIDDDEVVRASLAAYLEDSGFSVLQAGNGQQGLQVFERDQPDLVICDLRMP 60

Query: 80  VLNGIEFVEEVSSSYPSLPLVVVSATEEMADVAKALRFGIKDFLPKPITNHSHLASAIEK 139
            + G+E + +V+   P  P++VVS    M D  +ALR G  D+L KP+ + + L  ++ +
Sbjct: 61  QMGGLELIRQVTELAPQTPVIVVSGAGVMNDAVEALRLGAADYLIKPLEDLAVLEHSVRR 120

Query: 140 VLANDDHQRDFASCWYGADRQGSIPEEQELHWHLQYLKDNPNAAKELLEALLPEKDSQLG 199
            L   D  R          R+      +EL   L  L+++ NA +++   +LP     + 
Sbjct: 121 AL---DRARLLVE--NQRYREKLETANRELEASLNLLQEDQNAGRQVQMNMLPVSPWTID 175

Query: 200 SWKCSYRLLQSAELMPLVFDYAWLMNGQFVFYVVDAASHRECGAASTLLVRALFHDYL-R 258
            ++ +++++ S  L     DY  +   +  FY+ D + H    A  T+L++ +    L  
Sbjct: 176 DFQFAHQIIPSLYLSGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLFE 235

Query: 259 NLRNFSVELKDLAEI---IERGIHCSECIGKVSALFGVADLADGTLS 302
           + RN ++     +E+   I RG+   +    V+ + GV D   G L+
Sbjct: 236 SKRNGTLPEFTPSEVLGHINRGLISCKLGKHVTMVGGVIDEETGLLT 282