Pairwise Alignments

Query, 368 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., PcnB-degradosome interaction factor; response regulator from Escherichia coli BL21

 Score =  149 bits (375), Expect = 1e-40
 Identities = 97/313 (30%), Positives = 157/313 (50%), Gaps = 17/313 (5%)

Query: 20  QITAAKLILLVDDDPVFRRMTKGYLQKYGYQVIEAENGLDGLRKLRDHEPDLILCDLSMP 79
           Q    K IL+V+D+ VFR +   +    G   + A +G+D L  L    PDL++CD++MP
Sbjct: 3   QPLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAMP 62

Query: 80  VLNGIEFVEEVSSSYPSLPLVVVSATEEMADVAKALRFGIKDFLPKPITNHSHLASAIEK 139
            +NG++ +E + +     P++V+SATE MAD+AKALR G++D L KP+ + + L   +  
Sbjct: 63  RMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNRLREMV-- 120

Query: 140 VLANDDHQRDFASCWYGADRQGSIPEEQELHWHLQYLKDNPNAAKELLEALLPEKDSQLG 199
                       +C Y +     + EE+ L      + DNP AA +LL+ L P     + 
Sbjct: 121 -----------FACLYPSMFNSRVEEEERLFRDWDAMVDNPAAAAKLLQELQPPVQQVIS 169

Query: 200 SWKCSYRLLQSAELMPLVFDYAWLMNGQFVFYVVDAASHRECGAASTLLVRALFHDYLR- 258
             + +YR L +A+   LV D A L      FY +D       G  + LL+RALF+  L+ 
Sbjct: 170 HCRVNYRQLVAADKPGLVLDIAALSENDLAFYCLDVTRAGHNGVLAALLLRALFNGLLQE 229

Query: 259 NLRNFSVELKDLAEIIERGIHC---SECIGKVSALFGVADLADGTLSLLPAGLDCQWSNG 315
            L + +  L +L  ++++  H    +   G+   L G        L L+ AGL+   + G
Sbjct: 230 QLAHQNQRLPELGALLKQVNHLLRQANLPGQFPLLVGYYHRELKNLILVSAGLNATLNTG 289

Query: 316 YVHNRITSGVQLG 328
               +I++GV LG
Sbjct: 290 EHQVQISNGVPLG 302