Pairwise Alignments

Query, 368 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 513 a.a., sigma 54 dependent transcriptional activator from Agrobacterium fabrum C58

 Score = 75.5 bits (184), Expect = 3e-18
 Identities = 41/120 (34%), Positives = 72/120 (60%), Gaps = 3/120 (2%)

Query: 27  ILLVDDDPVFRRMTKGYLQKYGYQVIEAENGLDGLRKLRDH--EPDLILCDLSMPVLNGI 84
           +L++DDDPV RR+ K  +++YG+  + AENG  GL  L+ +  E ++I+ DL MP ++G+
Sbjct: 5   VLVIDDDPVQRRLLKNAVERYGHLALLAENGRAGLELLKQYSGEINVIVLDLMMPEMDGL 64

Query: 85  EFVEEVSSSYPSLPLVVVSATEEMADVAKALRFGIKDFLPKPITNHSHLASAIEKVLAND 144
            F++ V      +P++V +    +  V +A+R G  DF+ KP+ +   + +AI   L  D
Sbjct: 65  AFLKAVGELGTDVPVIVQTGQGGIDTVVQAMRAGAFDFVVKPV-SPERIGAAISNALKLD 123