Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  142 bits (357), Expect = 1e-38
 Identities = 83/288 (28%), Positives = 148/288 (51%), Gaps = 8/288 (2%)

Query: 11  LDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGE 70
           L  L +FR     GS+   +++  +  A +++ I  LE  L +RL+NR  R+++LTEAG 
Sbjct: 4   LTALKVFRTTAATGSFAGAARQMGLSAAAVSKNIAQLEAHLKVRLINRTTRQMSLTEAGA 63

Query: 71  RFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDIHI 130
            +++  S +L+ L+     +        G +R+SAP       + P    FM +YP++ +
Sbjct: 64  AYHERLSRILDELSEADAALAPMGSSPGGVLRVSAPLTFALTSLSPAIPEFMARYPNLRL 123

Query: 131 ELMMSNQADDLDPTEWDVIFRVGPQ-RDSSLIARKIGEVKDILVASPQYLSSHPQPTHAE 189
           EL + +   D+    +D+  R   +  DSSL+AR++  +  +L  +P Y ++  +P   E
Sbjct: 124 ELNLQDSRSDIIGEGYDLAIRGSDRLEDSSLVARRLMTMDHVLCGAPGYFATAGRPARPE 183

Query: 190 ELHQHQ----LLKGYPLLKWQLTNSQGETVVNSDRGRFQASALNVVRSACSEGLGITLMP 245
           +L  H+     L G+   KW  + + G +V     GR++ S+   VR A   G G++L+P
Sbjct: 184 DLKAHECVQFTLSGH-ANKWTFSRA-GRSVAVPVDGRYKVSSSIAVRDALLAGFGLSLIP 241

Query: 246 DVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFV 293
            + +   L  G L  VL DW ++   +Y +Y  + H   K R+F+DF+
Sbjct: 242 RIYVEHELASGRLQAVLEDWEADKTPVYAVYPSR-HLAAKTRVFVDFL 288