Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., Probable transcription regulator protein of MDR efflux pump cluster from Variovorax sp. SCN45

 Score =  152 bits (384), Expect = 9e-42
 Identities = 86/289 (29%), Positives = 149/289 (51%), Gaps = 7/289 (2%)

Query: 10  KLDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAG 69
           ++  + +F  VVE G++T  +    +P  T+T++IQALE  L ++LLNR  R++T+T  G
Sbjct: 3   QIQAMRIFVRVVEAGTFTRAADSLALPKGTVTKQIQALESRLRVKLLNRTTRRVTVTPDG 62

Query: 70  ERFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDIH 129
             +++  + LL     M   +T+     +GR+RI   +++ + +++P    F ++YPDI 
Sbjct: 63  AAYFERAARLLNDFDDMEASMTNAQANPTGRLRIDIGTSVARLVILPALATFCDRYPDIQ 122

Query: 130 IELMMSNQADDLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPQYLSSHPQPTHAE 189
           ++L +S++  DL     D + R G   D SL+AR+IG +  + VASP Y+  +  P H  
Sbjct: 123 VDLGVSDRTVDLISDNVDCVIRAGELSDQSLVARRIGTLHFVTVASPAYIKRYGMPQHPN 182

Query: 190 ELHQHQLLKGY------PLLKWQLTNSQGETVVNSDRGRFQASALNVVRSACSEGLGITL 243
           ++ +   +  Y       +   +      +  +N    R   +  N   +A   G GI+ 
Sbjct: 183 DIEKRHHVVSYFSGTTRRVYPHEFKKGDEQIELNGPY-RVSVNESNAHIAAVLGGFGISQ 241

Query: 244 MPDVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDF 292
               M    LE G LV+VL DWS +P  I+++Y    H   KVR F+D+
Sbjct: 242 CITFMAEPLLESGELVEVLPDWSRDPLPIHVVYPPNRHLSAKVRAFVDW 290