Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  140 bits (352), Expect = 5e-38
 Identities = 85/289 (29%), Positives = 140/289 (48%), Gaps = 6/289 (2%)

Query: 11  LDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGE 70
           L++L LF  V   GS+    K   +P +T++R+++ +E  L +RL+ R  R+L LTEAG 
Sbjct: 3   LNELALFLQVARLGSFALAGKALGVPASTVSRQVKNIEQQLGVRLMQRSTRRLVLTEAGR 62

Query: 71  RFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDIHI 130
              + C      +  +T E+ D     SG +RI+ PS+      +     F   +P + +
Sbjct: 63  LLVQRCETHFSAIGDVTREVLDGVGVVSGTLRIATPSDFFDWFPLSWLGEFRAMHPKVRL 122

Query: 131 ELMMSNQADDLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPQYLSSHPQPTHAEE 190
           E+   +   D+     D+ FR G    S L+A  +      LVAS  YLS    P + E+
Sbjct: 123 EIFAQDALVDVIGDGIDIAFRAGKLESSRLVAILLTTTSVFLVASAGYLSLRGTPRNPED 182

Query: 191 LHQHQ--LLKGYPLLK---WQLTNSQGETVVNSDRGRFQASALNVVRSACSEGLGITLMP 245
           L  H    L+  P      W++    GE  +   + RF ASA+ ++R A  EGLGI L+P
Sbjct: 183 LASHDGLTLRSSPSQSQRDWRVVGPAGEVRLEV-QSRFSASAMGLLRDAAVEGLGIALLP 241

Query: 246 DVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFVI 294
           +V++R  L+ G L +VL ++        +LY  +    +    F++F +
Sbjct: 242 EVLIRSELDAGRLQRVLPEYGQPSVSFSLLYPSRQQIQKAASAFVEFAV 290