Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  144 bits (362), Expect = 3e-39
 Identities = 86/285 (30%), Positives = 149/285 (52%), Gaps = 3/285 (1%)

Query: 14  LNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGERFY 73
           + +F  VVE GS++  +++      T+T+++ A E  L +RLLNR+ R ++LTE G  +Y
Sbjct: 7   MEMFVRVVETGSFSKAAREFNTTQPTVTKQVAATEARLKVRLLNRNTRGVSLTEPGALYY 66

Query: 74  KDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDIHIELM 133
           + C  ++         +      A G +R+       +R+++P+   +M ++P + ++L 
Sbjct: 67  EKCKTIVREAEEADSIVQLRQNQAQGLLRVGTSVAFGRRVVVPLALEYMRRHPQVQLDLS 126

Query: 134 MSNQADDLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPQYLSSHPQPTHAEELHQ 193
             ++  DL     DV  R+G   DSSL AR +G    ++VASP YL  H  P  A++L  
Sbjct: 127 FEDRYVDLIAQGIDVAIRMGKLADSSLGARYLGANPWVMVASPGYLKKHGTPKRAQDLSA 186

Query: 194 HQLLKGYPLLK---WQLTNSQGETVVNSDRGRFQASALNVVRSACSEGLGITLMPDVMLR 250
           H  L    ++    W++   +GE V     GRF+++ L+ V +A  +GLGI LMP  +  
Sbjct: 187 HVALIYSSVVGDEFWRMHTPKGEPVTVPVSGRFRSNNLSAVLAAARDGLGIALMPRYVAS 246

Query: 251 EFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFVIG 295
           E L  G + +VL D +   ++I+ ++      P KV  F+ F+ G
Sbjct: 247 ESLAAGKVHEVLGDHALPEQEIHAVFPSPKLVPGKVSGFVAFLQG 291