Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., D-malate degradation protein R from Alteromonas macleodii MIT1002

 Score =  136 bits (343), Expect = 5e-37
 Identities = 81/284 (28%), Positives = 143/284 (50%), Gaps = 4/284 (1%)

Query: 11  LDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGE 70
           L+ +  F  V + G++T  + K    VA I+R++ +LE  L ++LL R  R ++LTEAG 
Sbjct: 4   LEGIAEFCAVADVGNFTGAANKLDTSVAQISRKVASLEKQLGVKLLQRTTRSVSLTEAGT 63

Query: 71  RFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDIHI 130
           ++++   P L+ L      ++       G I+++AP    +  + P+ N FM+KY  I +
Sbjct: 64  QYFQQAMPALKALEDAQLAVSALQASPQGLIKLTAPVAFGEAFIAPLLNTFMQKYAGISV 123

Query: 131 ELMMSNQADDLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPQYLSSHPQPTHAEE 190
           +   SN+  D+     D+  R+G   DS+L+A+K+      +  S  Y     QP   EE
Sbjct: 124 QCTFSNEKLDIVEQGLDLAIRIGKLEDSTLVAKKLATRHLFVCGSRDYFKEQGQPISIEE 183

Query: 191 LHQHQLLKG-YPLLKWQLTNSQGETVVNSDRGRFQASALNVVRSACSEGLGITLMPDVML 249
           L +H LL G  P  +  + N      V   +GR + ++ N + SA   GLGI  +P   +
Sbjct: 184 LKEHSLLVGSQPYWRLLIDNKIQSIPV---QGRVRYNSGNALCSAAVAGLGIAQLPGFYV 240

Query: 250 REFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFV 293
           R+ L  G L+++  ++      I+ ++    +   K+RL +DF+
Sbjct: 241 RKALASGQLIELFPEYKDKQEAIWAVFPSNRNVAPKIRLLVDFL 284