Pairwise Alignments

Query, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

Subject, 716 a.a., 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein from Rhodanobacter sp000427505 FW510-R12

 Score =  384 bits (986), Expect = e-111
 Identities = 251/720 (34%), Positives = 373/720 (51%), Gaps = 22/720 (3%)

Query: 1   MDNNNAFQLSFDEQHYAWLAIDVPGEKMNTLQAAFAEEMQAVFATLNEKRGQIKGLIIHS 60
           M  NN   L  D      +  D PG  MN L         A+   L EK   IKGL++ S
Sbjct: 1   MTANNPVTLEIDADGIGLVTFDQPGRAMNVLNPELVAPFAAIVERL-EKEEAIKGLVLTS 59

Query: 61  LKPDNFIAGADVRMLEACQSVHEAQALASQGQQMFQQLADLPFPVVAAIHGPCLGGGLEL 120
            K   FI GAD+  L A  +  EA +L    + + +++     PVVAA++G  LGGGLE+
Sbjct: 60  GK-STFIVGADIDQLTAISTAEEAFSLCEDLKALLRRIEKCGKPVVAALNGTALGGGLEV 118

Query: 121 ALACDYRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGKQLRAKKA 180
           ALAC  R   ++   +LGLPEV LGLLPG GGTQRLPR+IG+  + +L+  G +LRA +A
Sbjct: 119 ALACHARFALDEAALKLGLPEVKLGLLPGGGGTQRLPRMIGIQKSFELLTQGTELRAAEA 178

Query: 181 KKLGVV-DACVPHSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLLANTDLGRKLIFDQAAK 239
           + LG+V D       LL  ++          +       +     +   G   +   A  
Sbjct: 179 RGLGLVNDLATSREELLQKSRAWCVANPRAAQPWDKQGFRIPGGDSKHPGVVQLLAIAPS 238

Query: 240 KTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRESK-ALRSIFFATT 298
               K  GNYPA   I+  +  G      A  + E++ FA  V+++ES+  + +++    
Sbjct: 239 IANAKAHGNYPAIGHIMSCLFEGCLLDFDAACQVESRYFAACVVSQESRNMIGTLWHQLN 298

Query: 299 EMKKDLGADAKPAP--VAAVGVLGGGLMGAGISHVTVAKAKTSVRIKDVANDGVLNALNY 356
            +KK     A  AP  V  +G+LG G+MGAGI++V+ AKA   V + D   +      +Y
Sbjct: 299 AIKKGQSRPAGVAPCRVRKIGILGAGMMGAGIAYVS-AKAGIEVILLDTTIENAEKGKSY 357

Query: 357 NYKLFDKQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVFEDLKLKQQMVADIE 416
           +  L +K   R   T  +  A +++++  T +     CD+VIEAVFED  +K       E
Sbjct: 358 SQGLLNKAILRGRSTPDKRDALLAKITPTTRYEDLQGCDLVIEAVFEDRAIKAACTQKAE 417

Query: 417 ANAKPTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLVEVIPHATTSDETIA 476
           A      +FA+NTS+LPI  +A  + RP+N +GLH+FSPV+KMPLVE+I    TS+ET+A
Sbjct: 418 AVIAADAVFASNTSTLPITGLAKASVRPKNFIGLHFFSPVDKMPLVEIIVGEQTSNETLA 477

Query: 477 TVVTLARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIEKLDAALLDFGFPVG 536
                  + GKTPIVV D  GFY +R+ A Y+ E   +L  G     ++AA +  G P+ 
Sbjct: 478 RGFDYVLQIGKTPIVVNDSRGFYTSRVFATYVMEGLAMLGEGVHPRSIEAAGIKAGMPMP 537

Query: 537 PITLLDEVGVDIGAKIMPILVKELG------PRFQGPDVFDVL-LKDNRKGRKSGKGFYT 589
           P+ L DEV + +   +     K+L       P   G  V  ++     R GRK+GKG Y 
Sbjct: 538 PLALQDEVSLGLSLHVADQTRKDLAAEGKPLPEHPGEPVLRMIGGTHQRLGRKTGKGLYD 597

Query: 590 YKGSKKKEVDKSVY-KLLKLTPES--KLNDKEIAMRCLLPMLNEAVRCLDEGIIRSARDG 646
           Y G      DK ++ +L +L P +  +   +E+  R +    NEA RC +E ++RS  D 
Sbjct: 598 YDGR-----DKHLWPELTRLYPTAAEQPTQQELIDRLMFVQANEAARCFEENVVRSVADA 652

Query: 647 DMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFAPCDGLLTRAGLGEKF 706
           ++G+IFG GF PF GG  +++  +G    V    +  E+YG RFAP D ++ +A +G +F
Sbjct: 653 NIGSIFGWGFAPFHGGALQFISAMGAAGFVARSRELAERYGARFAPADIVVKQAAVGGRF 712