Pairwise Alignments

Query, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

Subject, 685 a.a., 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein from Rhodanobacter sp000427505 FW510-R12

 Score =  391 bits (1004), Expect = e-113
 Identities = 248/694 (35%), Positives = 366/694 (52%), Gaps = 30/694 (4%)

Query: 5   NAFQLSFDEQHYAWLAIDVPGEKMNTLQAAFAEEMQAVFATLNEKRGQIKGLIIHSLKPD 64
           N ++ S  +     L +D  G  +N +  A  +E++ +   L  ++    G+I+HS KP 
Sbjct: 8   NHWKTSEGDDGVVTLTLDRAGSSVNAISRAVLDELEQIVERLAIEKPA--GVIVHSAKPS 65

Query: 65  NFIAGADVRMLEACQSVHEAQALASQGQQMFQQLADLPFPVVAAIHGPCLGGGLELALAC 124
            F  GADV+                 GQ++++ LA LP P VAA+HG C+GGG EL LAC
Sbjct: 66  GFAVGADVKEFIGYAKHDSVLENIEHGQRVYEALARLPCPTVAAVHGACMGGGTELMLAC 125

Query: 125 DYRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGKQLRAKKAKKLG 184
             R+  +D+ T++ LPEVMLG+ PG GGT RLPRLIG   AL L+LTGK L AK+A  LG
Sbjct: 126 RQRIAADDDKTKIALPEVMLGIHPGWGGTARLPRLIGATEALPLMLTGKSLSAKRALGLG 185

Query: 185 VVDACVPHSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLLANTDLGRKLIFDQAAKKTQQK 244
           VVD     + LL  AK LL     +  A+      +   +NT L R+++     K+T  K
Sbjct: 186 VVDRLARPNELLAEAKLLLRHPAPRPFARRA----KAWASNTWLARQILAPMVFKQTAAK 241

Query: 245 TRG-NYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRESKALRSIFFATTEMKKD 303
            R  +YPA  AI++V Q G   G+   L+ EA+  A+L  T  ++ L  IFF    +K  
Sbjct: 242 VRKEHYPAPFAIIDVWQRG-GSGIQQRLKIEARSVAKLAQTPTARNLIRIFFLQERLKAQ 300

Query: 304 LGADAKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRIKDVANDGVLNALNYNYKLFDK 363
                    +  V V+G G+MG  I+     K    V ++D     V  AL+   +L++K
Sbjct: 301 --GSGTEHGIKHVHVVGAGVMGGDIAAWAALKG-FEVTLQDREMKFVQPALDRARQLYEK 357

Query: 364 QRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVFEDLKLKQQMVADIEANAKPTT 423
               K+ T  Q++A M +L       G    ++ IEA++E+ + K+ + A IE   +   
Sbjct: 358 ----KLKTPEQVEAAMRRLRADVEGSGVASANLAIEAIYENARAKEALYASIEPQFRADE 413

Query: 424 IFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLVEVIPHATTSDETIATVVTLAR 483
           I A+NTSS+P+ ++    + PQ  +GLH+F+PV +MPLVEV+ H           +   +
Sbjct: 414 ILASNTSSIPLDELRGNLKAPQRFLGLHFFNPVAQMPLVEVVRHDRLDPAIEKRALAFCK 473

Query: 484 KQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIEKLDAALLDFGFPVGPITLLDE 543
             GK P+ VK   GF VNRIL PY+ EA ++   G P   LD     FG P+GPI L D 
Sbjct: 474 AIGKLPVAVKGTPGFLVNRILMPYLLEALRLYSEGVPGPVLDREAKKFGMPMGPIELADT 533

Query: 544 VGVDIGAKIMPILVKELGPRFQGPDVFDVLLKDNRKGRKSGKGFYTYKGSK--KKEVDKS 601
           VG+D+ A +   L   LG   + P   +  L   ++G+K G+G Y ++G K  K E+DK 
Sbjct: 534 VGLDVCASVGKELAPFLG--LELPPGLEEKLAAGKRGKKDGQGLYVWQGGKPEKPEIDKE 591

Query: 602 VYKLLKLTPESKLNDKEIAMRCLLPMLNEAVRCLDEGIIRSARDGDMGAIFGIGFPPFLG 661
                       +   ++  R +LPM+NEAV CL +G++  A   D G IFG GF PF G
Sbjct: 592 Y-----------VAPPDVQERMILPMVNEAVACLADGVVDDADLLDAGVIFGTGFAPFRG 640

Query: 662 GPFRYMDTLGLTKVVEMMNQHTEKYGERFAPCDG 695
           GP +Y+ + G  K+   + Q  ++YG+RF P +G
Sbjct: 641 GPIQYVRSEGAAKLKGRLEQLAQRYGDRFRPKNG 674