Pairwise Alignments

Query, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

Subject, 694 a.a., 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein from Rhodanobacter sp000427505 FW510-R12

 Score =  318 bits (816), Expect = 4e-91
 Identities = 224/652 (34%), Positives = 334/652 (51%), Gaps = 27/652 (4%)

Query: 66  FIAGADVRMLEACQSVHEAQALASQGQQMFQQLADLPFPVVAAIHGPCLGGGLELALACD 125
           F  GAD+R     Q++ E          +         PVVAAI G  LGGGLELAL  +
Sbjct: 57  FSGGADIREFNTPQALQEPTL-----PTVIAAFERSSKPVVAAIEGMALGGGLELALGMN 111

Query: 126 YRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGKQLRAKKAKKLGV 185
           YRV   D+  ++GLPEV LG+LPG+GGTQR PR +GL  A ++I++G  + A K     +
Sbjct: 112 YRVA--DQQAQIGLPEVKLGILPGAGGTQRFPRAVGLEAAANMIVSGTPVAAGKLGGTRL 169

Query: 186 VDACVPHSVLLDVAKRLLEEKGHKKRAQVTLP-IKEKLLANTDLGRKLIFDQAAKKTQQK 244
            D  V  S  LD A  L  E    +     LP +++  + + +    L F   A+     
Sbjct: 170 FDQVVK-SGTLDAAVTLANEVAGNRGP---LPRVRDWKIDHPNAEGFLGF---ARTGVAA 222

Query: 245 TRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRESKALRSIFFATTEMKK-- 302
              NYPA    L+ I+  + K    G+  E + FA LV T ESK+LR  FF+     K  
Sbjct: 223 VSANYPAPLKCLDAIEAAVTKSFEQGIHVEREAFAMLVQTPESKSLRHAFFSERAAGKVP 282

Query: 303 DLGADAKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRIKDVANDGVLNALNYNYKLFD 362
           D+GAD     +  VGV+G G MG GIS +    A   V I +   + +   L    K ++
Sbjct: 283 DIGADVPLREIGKVGVIGAGTMGGGIS-MNFLNAGIPVTILETKQEALDRGLGTIRKNYE 341

Query: 363 KQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVFEDLKLKQQMVADIEANAKPT 422
              ++  LT  Q++ +M  L+    +      D++IEAVFE+  +K+ +   ++  AKP 
Sbjct: 342 NSAKKGKLTTEQVEQRMGLLTPSLSYDDLKDADLIIEAVFEEYGVKEAVFKQLDQIAKPG 401

Query: 423 TIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLVEVIPHATTSDETIATVVTLA 482
            I A+NTS+L + +IA+   RPQ+++G+H+FSP   M L+EV+    T+ + +ATV+ LA
Sbjct: 402 AILASNTSTLDVDRIAAFTARPQDVIGMHFFSPANVMKLLEVVRGKQTAKDVLATVMALA 461

Query: 483 RKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIEKLDAALLDFGFPVGPITLLD 542
           +K  KT +V   C GF  NR++  Y  +A  +L  G   E++D A   FG  +GP  + D
Sbjct: 462 KKIRKTAVVSGVCDGFIGNRMIEQYARQAGFLLDEGALPEQVDRAAEKFGMAMGPFRMGD 521

Query: 543 EVGVDIGAKIMPILVKELGPRFQGPDVFDVLLKDNRKGRKSGKGFYTYK-GSKKKEVDKS 601
             G DIG  I      E  P        D L +  R G+K+GKG+Y YK G +K      
Sbjct: 522 MAGNDIGWAIRKRRAVE-QPDLTYSKSADKLCELGRFGQKTGKGWYDYKPGDRKAYPSAE 580

Query: 602 VYKLLKLTPES------KLNDKEIAMRCLLPMLNEAVRCLDEGIIRSARDGDMGAIFGIG 655
           V  L++   +       K++D+EI  R +  ++NE  R L++GI   A D D+  + G G
Sbjct: 581 VNALVEAHSKELGITRRKISDEEIVERLVYALVNEGARILEDGIASKASDIDIVYLTGYG 640

Query: 656 FPPFLGGPFRYMDTLGLTKVVEMMNQHTEKY-GERFAPCDGLLTRAGLGEKF 706
           FP + GGP  Y DT+GL  V+  M ++ + + G  + P   L+  A  G+ F
Sbjct: 641 FPLWHGGPMFYADTIGLYNVLAAMRRYAKGHEGAAWEPAPLLVALAEAGKSF 692