Pairwise Alignments

Query, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

Subject, 685 a.a., Fatty acid oxidation complex subunit alpha from Xanthobacter sp. DMC5

 Score =  291 bits (744), Expect = 9e-83
 Identities = 214/624 (34%), Positives = 317/624 (50%), Gaps = 45/624 (7%)

Query: 66  FIAGADVRMLEACQSVHEAQALASQGQQMFQQLADLPFPVVAAIHGPCLGGGLELALACD 125
           FIAGAD R   A         +      + +++   P PVVAAI+G  LGGGLE+ALAC 
Sbjct: 58  FIAGADAREFAAAP-------VEPHLPDIIRRIETFPVPVVAAINGAALGGGLEIALACR 110

Query: 126 YRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGKQLRAKKAKKLGV 185
            R+        LGLPEV LG++PG+GGTQRLPRL+GL PAL LI  G+ ++A++A+ +G+
Sbjct: 111 ARIAAPGAT--LGLPEVTLGIVPGAGGTQRLPRLVGLGPALSLIGEGRIIQAQEAEAMGL 168

Query: 186 VDACVPHSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLLANTDLGRKLIFDQAAKKTQQKT 245
           VDA     V +                  T+PI  +  A   L       +A K  +Q+ 
Sbjct: 169 VDAIATDPVAM----------------ARTIPIPAR-PATGVLPAPQPDAEAIKAARQQA 211

Query: 246 RGNYP---AAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRESKALRSIFFATTEMKK 302
               P   A    +++I+         GL  E + F +L  + ++ ALR +FFA  E   
Sbjct: 212 ARRSPGQIAPLKAIDLIEAATRLPFDEGLALERETFLDLKTSDQAAALRHVFFA--ERSA 269

Query: 303 DLGADAKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRIKDVAND--GVLNALNYNYKL 360
                A    +A+  V+GGG MGAGI++  V      + +  V ND  GV  A     +L
Sbjct: 270 MAQGKAGGRDIASAVVVGGGNMGAGIAYALVG---LGISVALVENDAAGVERARANVARL 326

Query: 361 F-DKQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVFEDLKLKQQMVADIEANA 419
           + D  ++ K   +A    Q ++LS   G+      D  IEAVFED+++K+Q+ + ++   
Sbjct: 327 YADAVKRGKTTAEAAAAEQATRLSFHEGYGALPPADFAIEAVFEDMEVKRQVFSALDRAL 386

Query: 420 KPTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLVEVIPHATTSDETIATVV 479
             TTI ATNTS L +++IA   + P+  +GLH+FSP   M L+EVI   TTS ET+AT +
Sbjct: 387 PKTTILATNTSYLDVNRIAEGLRHPERFLGLHFFSPAHVMKLLEVIRARTTSAETLATAL 446

Query: 480 TLARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIEKLDAALLDFGFPVGPIT 539
            LA +  K P++   C GF  NRIL  Y      +L+ G    ++D AL DFG  +GP  
Sbjct: 447 RLAARLKKIPVLAGVCDGFIGNRILTRYRQTCDIMLLEGALPAQVDQALRDFGMAMGPYE 506

Query: 540 LLDEVGVDIGAKIMPILVKELGPRFQGPDVFDVLLKD-NRKGRKSGKGFYTYKGSK---K 595
           + D  G+DI       L       F+   + D ++++  R GRK+  G+Y Y+G K    
Sbjct: 507 VQDLSGLDIAYANRKRLGWRTKDGFRYIPIADRIVEETGRLGRKTSAGWYDYEGGKASPS 566

Query: 596 KEVDKSVYK---LLKLTPESKLNDKEIAMRCLLPMLNEAVRCLDEGIIRSARDGDMGAIF 652
            ++D  V +      +T  S   D+EI  R +  M+ E  R L+EGI  +  D D+  I 
Sbjct: 567 AQIDAIVAEESGRAGITRRS-FPDEEIVARAVTAMVEEGFRILEEGIAANPADIDLVMIH 625

Query: 653 GIGFPPFLGGPFRYMDTLGLTKVV 676
           G  FP + GGP  Y   +G  +++
Sbjct: 626 GYAFPRWRGGPMHYAGRIGFPEIL 649