Pairwise Alignments

Query, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., 3-hydroxyacyl-CoA dehydrogenase from Pseudomonas simiae WCS417

 Score =  346 bits (888), Expect = 2e-99
 Identities = 233/709 (32%), Positives = 358/709 (50%), Gaps = 32/709 (4%)

Query: 19  LAIDVPGEKMNTLQAAFAEEMQAVFATLNEKRGQIKGLIIHSLKPDNFIAGADVRMLEAC 78
           L +D+PG+  NT+  A+ E M A+   L  ++  + G++I S K   F AG D+  L   
Sbjct: 17  LTLDMPGQSANTMNGAYREAMAAMVERLEAQKDDLAGVVITSAKK-TFFAGGDLNELIKV 75

Query: 79  QSVHEAQALAS--QGQQMFQQLADLPFPVVAAIHGPCLGGGLELALACDYRVCTEDEVTR 136
              H      S  + +   ++L  L  PVVAAI+G  LGGG E+ LAC YRV  +D+  +
Sbjct: 76  DKAHAKDFYDSVRELKAQLRRLETLGKPVVAAINGAALGGGWEICLACHYRVALDDKSVQ 135

Query: 137 LGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGKQLRAKKAKKLGVV-------DAC 189
           LGLPEV LGLLPG GG  R+ R++GL  AL  +L GK++R ++A + G+V       D  
Sbjct: 136 LGLPEVTLGLLPGGGGVVRMVRMLGLEKALPYLLEGKKVRPQQALQAGLVNELAADRDEL 195

Query: 190 VPHSVLLDVAKRLLEEKGHKKRAQVT--LPIKEKLLANTDLGRKLIFDQAAKKTQQKTRG 247
           +  S    +A    ++    K  Q+    P   K+     +   ++        + KT+G
Sbjct: 196 LAKSRAWILANPDAKQPWDNKGYQIPGGTPSSPKVAQMLAIAPSIL--------RSKTQG 247

Query: 248 NYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRESKALRSIF-FATTEMKKDLGA 306
            +PA + IL     G +         E + F ELV  + +K +   F F   E+      
Sbjct: 248 CFPAPEKILCAAVEGAQVDFDTAHLIETRYFTELVTGQVAKNMIGTFWFQLNEINAGSSR 307

Query: 307 DAKPAPVAA--VGVLGGGLMGAGISHVTVAKAKTSVRIKDVANDGVLNALNYNYKLFDKQ 364
               AP     VGVLG G+MGAGI++V+ A A   V +KD+          ++  L DK+
Sbjct: 308 PQGFAPYVTRKVGVLGAGMMGAGIAYVS-ASAGIEVVLKDINLAAAEKGKAHSAALLDKK 366

Query: 365 RQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVFEDLKLKQQMVADIEANAKPTTI 424
             R  LT  Q +  ++++           CD++IEAVFED +LK ++ A  ++      +
Sbjct: 367 VSRGQLTAEQRETFLARIHPTATDEDLAGCDLIIEAVFEDRELKAKVSAAAQSVVGADAV 426

Query: 425 FATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLVEVIPHATTSDETIATVVTLARK 484
            A+NTS+LPI  +A+        +GLH+FSPV+KMPLVE+I  A TSDET+A       +
Sbjct: 427 IASNTSTLPISGLATAVPDQTRFIGLHFFSPVDKMPLVEIIKGARTSDETLARGFDFVLQ 486

Query: 485 QGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIEKLDAALLDFGFPVGPITLLDEV 544
             KTPIVV D  GF+ +R+   + NE   +L  G     ++      G PVGP+ + DEV
Sbjct: 487 IKKTPIVVNDSRGFFTSRVFGTFTNEGIAMLGEGVAAPMIETEARKAGMPVGPLAVSDEV 546

Query: 545 GVDIGAKIMPILVKELG------PRFQGPDVFDVLLKD-NRKGRKSGKGFYTYKGSKKKE 597
            + +   I     K+L       P      V D+L+ +  R G+ +G GFY Y     K 
Sbjct: 547 SLSLMNHIRQQTAKDLQAEGKAVPTHPATAVIDLLVNEYQRMGKAAGGGFYDYPSGGHKY 606

Query: 598 VDKSVYKLLKLTPESKLNDKEIAMRCLLPMLNEAVRCLDEGIIRSARDGDMGAIFGIGFP 657
           +   +    +  P+ +++ +++  R L     E VRC++EG++ S  D ++G+IFGIGF 
Sbjct: 607 LWPELKSRFE-RPDQRISPQDVRDRLLFIQAIETVRCVEEGVLMSTADANVGSIFGIGFA 665

Query: 658 PFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFAPCDGLLTRAGLGEKF 706
           P+ GG  ++++  GL   +       E+YGERF P   LL +A  G+ F
Sbjct: 666 PWSGGALQFINQYGLNDFIARARYLAEQYGERFMPPALLLEKAAQGDVF 714