Pairwise Alignments

Query, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

Subject, 710 a.a., 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein from Variovorax sp. OAS795

 Score =  318 bits (815), Expect = 6e-91
 Identities = 216/631 (34%), Positives = 327/631 (51%), Gaps = 43/631 (6%)

Query: 65  NFIAGADVR----------MLEACQSVHEAQALASQGQQMFQQLADLPFPVVAAIHGPCL 114
           NFIAGAD+R          + E C ++                      PVVAAIHG  L
Sbjct: 67  NFIAGADIREFGKTPQPPSLPEVCLAIENCSK-----------------PVVAAIHGAAL 109

Query: 115 GGGLELALACDYRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGKQ 174
           GGGLE+AL+  YR+       +LGLPEV LGLLPGSGGTQR PRLIG+ PAL+L+L+G+ 
Sbjct: 110 GGGLEVALSAHYRLAAPS--AKLGLPEVALGLLPGSGGTQRAPRLIGVKPALELMLSGRH 167

Query: 175 LRAKKAKKLGVVDACVPHSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLLANTDLGRKLIF 234
             AK+A  LG+VD     +  L       +E    K A V    +   LA+++  R  + 
Sbjct: 168 AGAKEALSLGLVDRLGTEADALAEGLAYAQELVAAK-APVRRTREAAGLADSEASRAAL- 225

Query: 235 DQAAKKTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRESKALRSIF 294
           + A   T +K+RG + +   I+E ++  L      G+  E K F + + + +   L   F
Sbjct: 226 EAARADTAKKSRGLF-SPMKIIEAVEAALTLPFDEGMALERKLFLQCIDSPQRAGLIHAF 284

Query: 295 FATTE-MKKDLGADAKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRIKDVANDGVLNA 353
           FA  E +K      AKP  + A G++GGG MGAGI+ V +  A   V + +     +   
Sbjct: 285 FAEREVLKAPETKAAKPRALDAAGIVGGGTMGAGIA-VAMLDAGMPVTMIERDEPSLARG 343

Query: 354 LNYNYKLFDKQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVFEDLKLKQQMVA 413
             +  K++D   ++  +T     A M++ SG T +    + D+V+EAVFED+ +K+ + A
Sbjct: 344 RQHVEKVYDGLIKKGRMTPEAKAAVMTRFSGSTRYDALAQVDIVVEAVFEDMGVKKAVFA 403

Query: 414 DIEANAKPTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLVEVIPHATTSDE 473
           +++   KP  + ATNTS L I +IA+   RPQ++VGLH+FSP   M L+E++  A  S +
Sbjct: 404 ELDRVCKPGAVLATNTSYLDIDEIAASISRPQDVVGLHFFSPANIMKLLEIVVPAKVSAD 463

Query: 474 TIATVVTLARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIEKLDAALLDFGF 533
            +AT   LA+K  K P+    C GF  NRILA Y   A  ++  G    ++D A+ +FG+
Sbjct: 464 VVATGFELAKKLKKVPVRAGVCDGFIGNRILAVYRQAADHMMEDGASPYQIDEAVRNFGY 523

Query: 534 PVGPITLLDEVGVDIGAKIMPILVKELGPRFQGPDVFDVLLKDNRKGRKSGKGFYTY-KG 592
           P+GP  + D  G DIG            P+ +   + D + +    G+K+ +G+Y Y +G
Sbjct: 524 PMGPFQVSDLAGGDIGWATRKRKAATRDPKARYVQIADRICERGWFGQKTQRGYYLYPEG 583

Query: 593 SKKKEVDKSVYKLLK-------LTPESKLNDKEIAMRCLLPMLNEAVRCLDEGIIRSARD 645
           ++    D  V  ++        +TP +   D EI  R +  M+NE    + + I     D
Sbjct: 584 ARTGVPDPEVLAIIDAERARVGITPRTFTED-EIMRRYMAAMVNEGANVVHQRIALRPLD 642

Query: 646 GDMGAIFGIGFPPFLGGPFRYMDTLGLTKVV 676
            D+  ++G GFP   GGP +Y DT+GL KV+
Sbjct: 643 VDVTFLYGYGFPRHRGGPMKYADTVGLAKVL 673