Pairwise Alignments

Query, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., 3-hydroxyacyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

 Score =  217 bits (552), Expect = 1e-60
 Identities = 135/408 (33%), Positives = 214/408 (52%), Gaps = 14/408 (3%)

Query: 310 PAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRIKDVANDGVLNALNYNYKLFDKQRQRKI 369
           P P+  V V+G G MG GI  +++A A  SV   D     +   L    + + +Q  ++ 
Sbjct: 4   PFPINQVAVIGAGTMGRGIV-ISLANAGLSVLWLDCNAAALEAGLGMVSQAWAQQVDKQR 62

Query: 370 LTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVFEDLKLKQQMVADIEANAKPTTIFATNT 429
           +T+AQ  A ++++    G+      D+VIEAV+E+L LKQ++   ++A+ KP  I A+NT
Sbjct: 63  ITQAQADACLARVQAVDGYPALAEADLVIEAVYENLALKQEIFCALDAHLKPRAILASNT 122

Query: 430 SSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLVEVIPHATTSDETIATVVTLARKQGKTP 489
           S+L I  IA+  QRP  ++GLH+FSP   M L+E++    T  + +     L  + GK  
Sbjct: 123 SALDIDAIAAVTQRPSQVLGLHFFSPAHVMKLLEIVRGTHTDQKVLDAAKALGERMGKVA 182

Query: 490 IVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIEKLDAALLDFGFPVGPITLLDEVGVDIG 549
           IV  +C GF  NR+L  Y+ EA ++L+ G    ++DA L  FGF +GP  + D VG+D+ 
Sbjct: 183 IVAGNCPGFIGNRMLRSYVGEARKLLLEGALPHQVDAVLQQFGFAMGPFRMYDVVGIDLE 242

Query: 550 AKIMPILVKELGPRFQGP--DVFDVLLKDNRKGRKSGKGFYTY-KGSKKKEVDKSVYKLL 606
            +   +     G     P   V + L +  R G+K+G+G+Y Y  GS++ E D  V  L+
Sbjct: 243 WRARQL----AGQGMHDPLVQVDNALCELGRLGQKTGQGYYRYAPGSRQAEHDPQVDALV 298

Query: 607 KLTPES------KLNDKEIAMRCLLPMLNEAVRCLDEGIIRSARDGDMGAIFGIGFPPFL 660
               ++       ++ +EI  RCLL ++NE  + L EGI  S+ D D   + G GFP   
Sbjct: 299 LQVSQNLGYRRRGISAEEILERCLLALVNEGAKVLQEGIAASSGDIDQVWLHGYGFPAAT 358

Query: 661 GGPFRYMDTLGLTKVVEMMNQHTEKYGERFAPCDGLLTRAGLGEKFYP 708
           GGP R+ D  G   ++  +       GE + P   L +    G++F P
Sbjct: 359 GGPMRWADEQGAPFILARLEYLQGVLGEHWRPAGLLYSLVAGGKRFEP 406