Pairwise Alignments

Query, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., 3-hydroxyacyl-CoA dehydrogenase from Magnetospirillum magneticum AMB-1

 Score =  150 bits (379), Expect = 1e-40
 Identities = 95/285 (33%), Positives = 144/285 (50%), Gaps = 9/285 (3%)

Query: 316 VGVLGGGLMGAGISHVTVAKAKTSVRIKDVANDGVLNALNYNYKLFDKQRQRKILTKAQL 375
           +G++G G MG GI+ + VA   T + + D        A +    +  K  ++  LT    
Sbjct: 12  LGLVGSGTMGRGIAQIAVASGVTVILV-DALPGAAAKARDAVSAMLAKLAEKGKLTAEAC 70

Query: 376 QAQMSQLSGGTGFVGFDRCDVVIEAVFEDLKLKQQMVADIEANAKPTTIFATNTSSLPIH 435
            +  ++L  G        C VV+EA+ ED+K+KQ ++ D+EA      + A+NTSSL + 
Sbjct: 71  ASATARLKLGESLADLAPCHVVVEAIVEDIKVKQALMKDLEAIVSKDCLIASNTSSLSVT 130

Query: 436 QIASQAQRPQNIVGLHYFSPVEKMPLVEVIPHATTSDETIATVVTLARKQGKTPIVVKDC 495
            IA+  Q PQ + G H+F+PV  M +VEVI    T+   + T+  LAR+ G TP+  KD 
Sbjct: 131 SIAAACQHPQRVGGFHFFNPVPLMKVVEVIDGVMTAPWVVETLTALARRMGHTPVKAKDT 190

Query: 496 AGFYVNRILAPYMNEAAQVLMAGEPIEKLDAA--LLD--FGFPVGPITLLDEVGVDIGAK 551
            GF VN     Y  EA +  + GE +     A  +L    GF +GP  LLD   +D+   
Sbjct: 191 PGFVVNHAGRGYGTEALK--LVGEGVTDFFTADRILKGAAGFRMGPFELLDLTALDVSHP 248

Query: 552 IMPILVKEL--GPRFQGPDVFDVLLKDNRKGRKSGKGFYTYKGSK 594
           +M  +  +    PRF+   +    L     GRK+G+GFY Y+G K
Sbjct: 249 VMESIYDQYYQEPRFRPSPITRSRLVAGLLGRKTGRGFYAYEGDK 293



 Score = 32.0 bits (71), Expect = 8e-05
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 9/70 (12%)

Query: 491 VVKDCAGFYVNRILAPYMNE----AAQVLMAGEPIEKLDAALLDFGFPVGPITLLDEVGV 546
           V+ D  G    R++A  +N     A Q +   + I+K  A  L  G+P GP++  D +G 
Sbjct: 409 VIADSPGLVAQRVVATIVNIGCDIAQQRIATPDDIDK--AVTLGLGYPAGPLSWGDRIG- 465

Query: 547 DIGAKIMPIL 556
              AK++ IL
Sbjct: 466 --AAKVVAIL 473