Pairwise Alignments

Query, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

Subject, 714 a.a., fused enoyl-CoA hydratase and epimerase and isomerase/3-hydroxyacyl-CoA dehydrogenase (NCBI) from Escherichia coli BW25113

 Score =  785 bits (2027), Expect = 0.0
 Identities = 400/711 (56%), Positives = 531/711 (74%), Gaps = 9/711 (1%)

Query: 1   MDNNNAFQLSFDEQHYAWLAIDVPGEKMNTLQAAFAEEMQAVFATLNEKRGQIKGLIIHS 60
           M+  +AF L+    + A + IDVPGEKMNTL+A FA +++A+   L E + +++G++  S
Sbjct: 1   MEMTSAFTLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENK-ELRGVVFVS 59

Query: 61  LKPDNFIAGADVRMLEACQSVHEAQALASQGQQMFQQLADLPFPVVAAIHGPCLGGGLEL 120
            KPDNFIAGAD+ M+  C++  EA+ALA QGQQ+  ++  LP  V+AAIHG CLGGGLEL
Sbjct: 60  AKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIQVIAAIHGACLGGGLEL 119

Query: 121 ALACDYRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGKQLRAKKA 180
           ALAC  RVCT+D  T LGLPEV LGLLPGSGGTQRLPRLIG+  AL++ILTGKQLRAK+A
Sbjct: 120 ALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQA 179

Query: 181 KKLGVVDACVPHSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLLANTDLGRKLIFDQAAKK 240
            KLG+VD  VPHS+LL+ A  L +++    R    LP++E++LA   LGR L+F    KK
Sbjct: 180 LKLGLVDDVVPHSILLEAAVELAKKERPSSRP---LPVRERILAGP-LGRALLFKMVGKK 235

Query: 241 TQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRESKALRSIFFATTEM 300
           T+ KT+GNYPA + ILEV++ GL +G  +G + EA+ F EL MT +S+ALRSIFFA+T++
Sbjct: 236 TEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDV 295

Query: 301 KKDLGADAKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRIKDVANDGVLNALNYNYKL 360
           KKD G+DA PAP+ +VG+LGGGLMG GI++VT  KA   VRIKD+   G+ +AL Y++  
Sbjct: 296 KKDPGSDAPPAPLNSVGILGGGLMGGGIAYVTACKAGIPVRIKDINPQGINHALKYSWDQ 355

Query: 361 FDKQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVFEDLKLKQQMVADIEANAK 420
            + + +R+ L  ++   Q++ +SG T + GF   D++IEAVFE+L+LKQQMVA++E N  
Sbjct: 356 LEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCA 415

Query: 421 PTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLVEVIPHATTSDETIATVVT 480
             TIFA+NTSSLPI  IA+ A RP+ ++GLH+FSPVEKMPLVE+IPHA TS +TIAT V 
Sbjct: 416 AHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVK 475

Query: 481 LARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIEKLDAALLDFGFPVGPITL 540
           LA+KQGKTPIVV+D AGFYVNRILAPY+NEA ++L  GE +E +DAAL+ FGFPVGPI L
Sbjct: 476 LAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQL 535

Query: 541 LDEVGVDIGAKIMPILVKELGPRFQGP-DVFDVLLKDNRKGRKSGKGFYTY--KGSK-KK 596
           LDEVG+D G KI+P+L    G RF  P +V   +L D+RKGRK+G+GFY Y  KG K KK
Sbjct: 536 LDEVGIDTGTKIIPVLEAAYGERFSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKK 595

Query: 597 EVDKSVYKLLKLTPESKLNDKEIAMRCLLPMLNEAVRCLDEGIIRSARDGDMGAIFGIGF 656
           +VD ++Y L+    + +++  ++A RC++ MLNEAVRC+DE +IRS RDGD+GA+FGIGF
Sbjct: 596 QVDPAIYPLIGTQGQGRISAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIGAVFGIGF 655

Query: 657 PPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFAPCDGLLTRAGLGEKFY 707
           PPFLGGPFRY+D+LG  +VV +M +   +YG RF PC+ L+     GE F+
Sbjct: 656 PPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARGESFW 706