Pairwise Alignments

Query, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

Subject, 728 a.a., fatty acid oxidation complex subunit alpha FadB from Erwinia amylovora T8

 Score =  398 bits (1023), Expect = e-115
 Identities = 256/684 (37%), Positives = 376/684 (54%), Gaps = 37/684 (5%)

Query: 9   LSFDEQHYAWLAIDVPGEKMNTLQAAFAEEMQAVFATLNEKRGQIKGLIIHSLKPDNFIA 68
           L + E   A L  D PG  +N L       +     TL ++ G ++G+++ S K   FI 
Sbjct: 10  LDWLEDGIAELVFDAPGS-VNKLDTQTVTSLGEAITTLEQQPG-LRGVLLSSRK-SAFIV 66

Query: 69  GADVRM---LEACQSVHEAQALASQGQQMFQQLADLPFPVVAAIHGPCLGGGLELALACD 125
           GAD+     L A  +   AQ LA     +F +L DLP P VAAI+G  LGGG E  LA D
Sbjct: 67  GADIMAFLSLFAAPAEQLAQWLAF-ANGVFNRLEDLPVPTVAAINGYALGGGCECVLATD 125

Query: 126 YRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGKQLRAKKAKKLGV 185
           +R+ + D  TR+GLPE  LG++PG GG+ R+PRL+G   ALD+I  GK + A +A K+G+
Sbjct: 126 FRIASAD--TRIGLPETKLGIIPGFGGSVRMPRLLGADSALDIIAGGKDIDAAQALKVGL 183

Query: 186 VDACVP----HSVLLDVAKRLLEEK-GHKKRAQVTL-PIKEKLLANTDLGRKLIFDQAAK 239
           VDA V     H+  L V K  +  +   ++R Q+ L P+K   L+N +    + F  A  
Sbjct: 184 VDAVVSVDKLHAAALSVLKEAIAGRLPWRERRQIKLEPLK---LSNIEAA--MSFSTAEA 238

Query: 240 KTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRESKALRSIFF---- 295
              Q    +YPA   +++ I+     G     + E   F  L  + E++AL  IF     
Sbjct: 239 MVLQTAGKHYPAPLTVVQTIEAAAGSGRDEAQKLETAAFVPLARSDEARALVGIFLNDQM 298

Query: 296 ATTEMKKDLGADAKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRIKDVANDGVLNALN 355
              ++KK +   A P   A   VLG G+MG GI++ +  K    + +KD++   +   + 
Sbjct: 299 VKAKVKKQIKDVAAPERAA---VLGAGIMGGGIAYQSACKG-VPIMMKDISEKALTLGIG 354

Query: 356 YNYKLFDKQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVFEDLKLKQQMVADI 415
              KL +KQ  R  +   +L   +S +     + GFDR DVV+EAV E+ ++K +++A+ 
Sbjct: 355 EAAKLLNKQLMRGKIDGLKLAGIISTIQPVLHYAGFDRVDVVVEAVVENPQVKAEVLAEA 414

Query: 416 EANAKPTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLVEVIPHATTSDETI 475
           E + +P  I A+NTS++PI Q+A    RP+N  G+H+F+PV +MPLVEVI  + TSD TI
Sbjct: 415 ERHIRPDAILASNTSTIPIDQLAEALTRPENFCGMHFFNPVPRMPLVEVIRGSKTSDATI 474

Query: 476 ATVVTLARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIEKLDAAL-LDFGFP 534
           A VV  A K GKTPIVV DC GF+VNR+L PY    + +L  G    ++D  +   FG+P
Sbjct: 475 AKVVAWASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGADFRQIDKVMEKQFGWP 534

Query: 535 VGPITLLDEVGVDIGAKIMPILVKELGPRFQGP--DVFDVLLKDNRKGRKSGKGFYTY-- 590
           +GP  LLD VG+D       ++      R      D  DVL    R G+K+ +GF+ +  
Sbjct: 535 MGPSWLLDVVGIDTAHHAQSVMAVGFPSRMNKDYRDAVDVLFAAKRYGQKNQQGFWRWET 594

Query: 591 --KGSKKKEVDKSVYKLLK--LTPESKLNDKEIAMRCLLPMLNEAVRCLDEGIIRSARDG 646
             KG  +K  D     LL+    P+   +D++I  R ++PM+NE VRCLDEG+I S  + 
Sbjct: 595 DSKGKLQKVSDSETDDLLQSVCQPKRVFSDEDIVARMMIPMINEVVRCLDEGVIASPAEA 654

Query: 647 DMGAIFGIGFPPFLGGPFRYMDTL 670
           DM  ++G+GFPPF GG FRY+DT+
Sbjct: 655 DMALVYGLGFPPFHGGAFRYLDTV 678