Pairwise Alignments

Query, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

Subject, 729 a.a., fatty acid oxidation complex subunit alpha FadB from Escherichia coli ECRC62

 Score =  426 bits (1094), Expect = e-123
 Identities = 274/722 (37%), Positives = 394/722 (54%), Gaps = 38/722 (5%)

Query: 9   LSFDEQHYAWLAIDVPGEKMNTLQAAFAEEMQAVFATLNEKRGQIKGLIIHSLKPDNFIA 68
           L + E   A L  D PG  +N L  A    +      L E++  +KGL++ S K   FI 
Sbjct: 10  LDWLEDGIAELVFDAPGS-VNKLDTATVASLGEAIGVL-EQQSDLKGLLLRSNKAA-FIV 66

Query: 69  GADVRMLEACQSVHEAQALASQGQQ----MFQQLADLPFPVVAAIHGPCLGGGLELALAC 124
           GAD+    +   V E Q   SQ  Q    +F +L DLP P +AA++G  LGGG E  LA 
Sbjct: 67  GADITEFLSLFLVPEEQL--SQWLQFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLAT 124

Query: 125 DYRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGKQLRAKKAKKLG 184
           DYR+ T D   R+GLPE  LG++PG GG+ R+PR++G   AL++I  GK + A +A K+G
Sbjct: 125 DYRLATPD--LRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGADQALKIG 182

Query: 185 VVDACVPHSVLLDVAKRLLEEKGH------KKRAQVTLPIKEKLLANTDLGRKLIFDQAA 238
           +VD  V    L++ AK +L +  +       KR     P+K   +  T     + F  A 
Sbjct: 183 LVDGVVKAEKLVEGAKAVLRQAINGDLDWKAKRQPKLEPLKLSKIEAT-----MSFTIAK 237

Query: 239 KKTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRESKALRSIFFATT 298
               Q    +YPA    ++ I+     G    L  E K F  L  T E++AL  IF    
Sbjct: 238 GMVAQTAGKHYPAPITAVKTIEAAARFGREEALNLENKSFVPLAHTNEARALVGIFLNDQ 297

Query: 299 EMK---KDLGADAKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRIKDVANDGVLNALN 355
            +K   K L  D +    AAV  LG G+MG GI++ +  K    V +KD+ +  +   + 
Sbjct: 298 YVKGKAKKLTKDVETPKQAAV--LGAGIMGGGIAYQSAWKG-VPVVMKDINDKSLTLGMT 354

Query: 356 YNYKLFDKQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVFEDLKLKQQMVADI 415
              KL +KQ +R  +   +L   +S +     + GFDR DVV+EAV E+ K+K+ ++A+ 
Sbjct: 355 EAAKLLNKQLERGKIDGLKLAGVISTIHPTLDYAGFDRVDVVVEAVVENPKVKKAVLAET 414

Query: 416 EANAKPTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLVEVIPHATTSDETI 475
           E   +P T+ A+NTS++PI ++A+  +RP+N  G+H+F+PV +MPLVE+I    +SDETI
Sbjct: 415 EQKVRPDTVLASNTSTIPISELANALERPENFCGMHFFNPVHRMPLVEIIRGEKSSDETI 474

Query: 476 ATVVTLARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIEKLDAAL-LDFGFP 534
           A VV  A K GKTPIVV DC GF+VNR+L PY    +Q+L  G    K+D  +   FG+P
Sbjct: 475 AKVVAWASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKIDKVMEKQFGWP 534

Query: 535 VGPITLLDEVGVDIGAKIMPILVKELGPRFQGP--DVFDVLLKDNRKGRKSGKGFYTY-- 590
           +GP  LLD VG+D       ++      R Q    D  D L   NR G+K+G GF+ Y  
Sbjct: 535 MGPAYLLDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWRYKE 594

Query: 591 --KGSKKKEVDKSVYKLLK--LTPESKLNDKEIAMRCLLPMLNEAVRCLDEGIIRSARDG 646
             KG  KKE D  V  LL     P+   +++EI  R ++PM+NE VRCL+E II +  + 
Sbjct: 595 DSKGKPKKEEDAVVDDLLAEVSQPKRDFSEEEIIARMMIPMVNEVVRCLEESIIATPAEA 654

Query: 647 DMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFAPCDGLLTRAGLGEKF 706
           DM  I+G+GFPPF GG FR++DTLG  K ++M  Q+ +  G  +   +GL  +A   E +
Sbjct: 655 DMALIYGLGFPPFHGGAFRWLDTLGSAKYLDMAQQY-QHLGPLYEVPEGLRNKARHNEPY 713

Query: 707 YP 708
           YP
Sbjct: 714 YP 715