Pairwise Alignments

Query, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., 3-hydroxybutyryl-CoA dehydrogenase from Agrobacterium fabrum C58

 Score =  152 bits (384), Expect = 2e-41
 Identities = 101/286 (35%), Positives = 154/286 (53%), Gaps = 6/286 (2%)

Query: 311 APVAAVGVLGGGLMGAGISHVTVAKAKTSVRIKDVANDGVLNAL-NYNYKLFDKQRQRKI 369
           AP   +GV+G G MG GI+HV+ A A   V I D++ +G+   L   N  L  +    K+
Sbjct: 3   APFKNIGVIGAGQMGCGIAHVS-AIAGYRVHIYDLSKEGIEAGLATINGNLARQVTNNKL 61

Query: 370 LTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVFEDLKLKQQMVADIEANAKPTTIFATNT 429
              A+ QA ++ +SG T        D+VIEA  E+ ++K+++ A +    KP  + ATNT
Sbjct: 62  SDDARKQA-LALISGSTDVNDLAPMDIVIEAATENEEIKRKIYAQVCPVLKPEALLATNT 120

Query: 430 SSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLVEVIPHATTSDETIATVVTLARKQGKTP 489
           SSL I ++AS   RP+  +G+H+ +PV  M LVE++    T+++T        R   K  
Sbjct: 121 SSLSITRLASATDRPEQFMGIHFMNPVPVMKLVELVRGIATNEKTFDAAKAYVRTLEKAI 180

Query: 490 IVVKDCAGFYVNRILAPYMNEAAQVLMAG-EPIEKLDAAL-LDFGFPVGPITLLDEVGVD 547
            V +D   F VNRIL P +NEA   L  G   +E +D A+ L    P+GP+ L D +G+D
Sbjct: 181 TVAEDFPAFIVNRILLPMINEAIYTLYEGVGSVEAIDTAMRLGANHPMGPLQLADFIGLD 240

Query: 548 IGAKIMPILVKELG-PRFQGPDVFDVLLKDNRKGRKSGKGFYTYKG 592
               IM +L   L   +++   +    ++    GRKSG+GFY Y+G
Sbjct: 241 TCLSIMQVLHDGLSDSKYRPCPLLVKYVEAGWLGRKSGRGFYDYRG 286



 Score = 33.9 bits (76), Expect = 1e-05
 Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 5/76 (6%)

Query: 619 IAMRCLLPMLNEAVRCLDEGIIRSARDGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEM 678
           I  R LLPM+NEA+  L EG + S    D     G   P    GP +  D +GL   + +
Sbjct: 190 IVNRILLPMINEAIYTLYEG-VGSVEAIDTAMRLGANHPM---GPLQLADFIGLDTCLSI 245

Query: 679 MN-QHTEKYGERFAPC 693
           M   H      ++ PC
Sbjct: 246 MQVLHDGLSDSKYRPC 261