Pairwise Alignments

Query, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., Fatty acid oxidation complex subunit alpha from Acinetobacter radioresistens SK82

 Score =  345 bits (886), Expect = 3e-99
 Identities = 239/723 (33%), Positives = 368/723 (50%), Gaps = 41/723 (5%)

Query: 5   NAFQLSFDEQHYAWLAIDVPGEKMNTLQAAFAEEMQAVFATLNEKRGQIKGLIIHSLKPD 64
           +A Q   +      L +D  G+  NT+ A F   +  V   L  +  ++KG+I  S K  
Sbjct: 2   SAIQYEKNTDQIVVLTLDSSGQSANTMNAEFRASLDKVVQQLRAET-EVKGIIFRSAKK- 59

Query: 65  NFIAGADVRMLEACQSVHEAQALASQGQQMFQQL-ADLPF------PVVAAIHGPCLGGG 117
            F AG D+  L     V    A A++   M Q+L ADL +      PVVA ++G  LGGG
Sbjct: 60  TFFAGGDLDEL-----VTTTPAQATEFFHMVQKLKADLRYIETMGIPVVACLNGTALGGG 114

Query: 118 LELALACDYRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGKQLRA 177
            ELAL C YR+  +D  T+ GLPEV LGLLPG GG  R+ RL+G+  AL  ++ GKQ   
Sbjct: 115 WELALGCHYRIALKDSKTKFGLPEVTLGLLPGGGGIVRMIRLLGIQTALPYLIEGKQFGV 174

Query: 178 KKAKKLGVVDACVPHSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLLANTDLGRKLIFDQA 237
           +KA  LG++     H    ++ ++  +      ++Q    +K   +   D     +    
Sbjct: 175 EKALSLGLIHDTADHEE--ELLQKAFDWIQAHPQSQQPFDVKGFKIPGGDPKHPAVAQML 232

Query: 238 AKKTQ---QKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRESKALRSIF 294
           A        KT+G YPA +AIL     G +      L  E++ F  L   + SK +   F
Sbjct: 233 AIAPAILTDKTKGCYPAPEAILAAAVEGAQVDFDTALTIESRAFTYLATGQVSKNMIGTF 292

Query: 295 FATTEMKKDLGADAKPA-----PVAAVGVLGGGLMGAGISHVTVAKAKTSVRIKDVANDG 349
           +      K  GA ++PA         V VLG G+MGAGI++    K   SV +KDV+ + 
Sbjct: 293 WHGLNAIKS-GA-SRPAGYEKWQAKKVAVLGAGMMGAGIAYAIAIKG-ISVILKDVSIEN 349

Query: 350 VLNALNYNYKLFDKQRQRKILTKAQLQAQMSQLSGGTGFVG-FDRCDVVIEAVFEDLKLK 408
                 Y+ KL DK+  +  ++ A+ + Q+ QL   T  +   + CD+VIEAVFE+ +LK
Sbjct: 350 AEKGKAYSQKLLDKKVSQGRMS-AEKRDQILQLIHPTADMSTLEGCDLVIEAVFENQQLK 408

Query: 409 QQMVADIEANAKPTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLVEVIPHA 468
            Q+    E     T + A+NTS+LPI  +A  ++     +GLH+FSPV+KM LVE+I   
Sbjct: 409 AQVTQQAEIYLNETGVMASNTSTLPISDLAQASRNAAQFIGLHFFSPVDKMQLVEIIKGQ 468

Query: 469 TTSDETIATVVTLARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIEKLDAAL 528
            TS  T+A      ++ GKTPIVV D  GF+ +R+   ++ E  ++L  G     ++ A 
Sbjct: 469 QTSAATLAKAYDFVQQIGKTPIVVNDSRGFFTSRVFGKFVQEGLRMLAEGIHPASIEMAA 528

Query: 529 LDFGFPVGPITLLDEVGVDIG-------AKIMPILVKELGPRFQGPDVFDVLLKD-NRKG 580
           L  G PVGP+ + DEV + +         K +  + ++L P     +V   ++ + +RKG
Sbjct: 529 LKAGMPVGPLAIQDEVSLTLSEHVAKETRKALQAIAQDL-PLTPADEVIQTMIHEFDRKG 587

Query: 581 RKSGKGFYTYKGSKKKEVDKSVYKLLKLTPESKLNDKEIAMRCLLPMLNEAVRCLDEGII 640
           + +G+GFY Y    KK + K    L +     ++ ++E+  R L     + +RCL+EG++
Sbjct: 588 KAAGQGFYEYPAQGKKYLWKG---LSRWNKNKEVPEQELIERFLFVQALDTLRCLEEGVL 644

Query: 641 RSARDGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFAPCDGLLTRA 700
            S  D ++G+IFGIG+ P+ GG  +Y++  GL + +    Q   +YGERFAP   L   A
Sbjct: 645 ESVVDANVGSIFGIGYAPWTGGAIQYLNQYGLERALARAEQLAAEYGERFAPPQRLRQHA 704

Query: 701 GLG 703
             G
Sbjct: 705 QSG 707