Pairwise Alignments

Query, 428 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., Long-chain fatty acid transport protein from Pseudomonas simiae WCS417

 Score =  144 bits (362), Expect = 7e-39
 Identities = 114/424 (26%), Positives = 182/424 (42%), Gaps = 44/424 (10%)

Query: 5   RLFKKSLLAVTVTLATQQAFAAGFQLNAQSATGLGRAFAGDAVIADNAAVMSRNPAAMAL 64
           ++  K+ L++ V +A+   FA+GF LN Q   G+G  FAG +  A+NA+ +  NPA MA 
Sbjct: 3   KVMLKTTLSLAVAMASSHIFASGFALNEQDVAGMGTGFAGRSSSAENASTVYGNPAGMAR 62

Query: 65  FDEMALSLGFETITTMIDVKNVSYRGVLGNSVSVQDTDDVGGTSVAPNIHLIVPVNEQFA 124
            +   ++ G   I    ++K+VS     G S      D V  T+V P       +N+Q+A
Sbjct: 63  LEGQQVTGGVAAIDASSNIKDVS-----GRSSGTNKGDMVPFTAV-PFGFYTNKLNDQWA 116

Query: 125 WGVNAYSNFGTKTEFSDSYPASEYGGLTDVKSFNLGLAGSYRVNKEWSFGAGLDLIYGQG 184
            G   Y+ FG  T++   +    +G  ++V         SY  N   S G G        
Sbjct: 117 VGFGVYAPFGLVTDYESGFQGKAFGSKSEVTVITFQPTVSYAFNDRVSIGFG-------P 169

Query: 185 TMKRIAGTSFPASTIVVNPTTVIPARGTSLLNVD-KADGWAVGFNLGTVYEMDENNRFGL 243
           T+ RIAGT        +     +P  GT   N+  K D  AVGFN G + +  +  R GL
Sbjct: 170 TINRIAGT--------LESDINLPVAGTGSNNIKIKGDDTAVGFNAGLLVQATDTTRVGL 221

Query: 244 SY----RYSPEFKAKDDYGQEITLPLPDIAEFSGFHKIENTQ-------------FAVHY 286
           +Y    +Y  E   +   G  +   L +   +    KI+  +             + ++ 
Sbjct: 222 TYHSKVKYKLEGHTEVTKGTNVPASLLNNGRYDASLKIDTPESWDLSVTQDMSDAWKLYA 281

Query: 287 SVQWIGWSAFDKIEFRNL-VTSRSSVGALTK---GSYDKMYEWQDGWHYSIGGTYYLNSD 342
              W  WS    I   N  V++ +  G L     G+  +   W D W Y++G +Y +   
Sbjct: 282 GATWTRWSRLKDITVNNEGVSAAAGSGVLAPQIVGTIKEDQNWHDTWAYAVGTSYRVTKQ 341

Query: 343 WTLRAGYMYDTS-AQDSRTSISVPDSDRQWLSAGFTYNIDDKSNVDFGFTYLMGKDVAVS 401
             LR G  +D S   ++  S  +P  DR   S G  Y++     VD  ++YL  + V V+
Sbjct: 342 VVLRTGLTFDQSPTNNTDRSPRIPTGDRTIFSLGLGYDVMPNMTVDLAYSYLKEEPVKVA 401

Query: 402 ENDA 405
             +A
Sbjct: 402 RANA 405