Pairwise Alignments

Query, 428 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., aromatic hydrocarbon degradation membrane protein from Sphingobium sp. HT1-2

 Score = 87.8 bits (216), Expect = 6e-22
 Identities = 105/417 (25%), Positives = 166/417 (39%), Gaps = 53/417 (12%)

Query: 18  LATQQAFAAGFQLNAQSATGLGRAFAGDAVIADNAAV-MSRNPAAMALFDEMALSLGFET 76
           LA Q A A  F L  QS+ G GRAF+G+  +AD     +  NPAA+A  + +        
Sbjct: 20  LAPQAASAQAFYLQEQSSRGAGRAFSGE--VADQGVQSLWWNPAAIAGMEGVDAHQAVSV 77

Query: 77  ITTMIDVKNVSYRGVL-GNSVSV----QDTDDVGGTSVAPNIHLIVPVNEQFAWGVNAYS 131
           I     V NV+   V  G S +     Q + D     V P+  + V +  + A G+   S
Sbjct: 78  ILPKGSVDNVNTLIVRPGQSAAAVGGSQRSRDPINNGVLPSGAIAVGLTSRLALGLTVAS 137

Query: 132 NFGTKTEFSDSYPASEYGGLTDVKSFNLGLAGSYRVNKEWSFGAGLDLIYGQGTMKRIAG 191
            +   T +     A      T ++++++  + +Y V    S GA L++ Y   ++     
Sbjct: 138 PYSFTTNYDADSWARYSADKTKLRTYDIQPSIAYLVTPNLSIGAALNIEYADASLSNYLP 197

Query: 192 TSFPASTIVVNPTTVIPARGTSLLNVDKADGWAVGFNLGTVYEMDENNRFGLSYRYSPEF 251
              P           + A G   L   K +GW +G++ G  Y      + G SY+ S + 
Sbjct: 198 NLSP-----------LLADGHQEL---KGNGWDLGWSAGLQYRAGPM-QLGASYKSSVKH 242

Query: 252 KAKDDY----------GQE------ITLPLPDIAEFSGFHKIENTQFAVHYSVQWIGWSA 295
                           GQ        T   P  A F G     + +  ++  V  +GWS 
Sbjct: 243 NLDGSVTTTGLLGPLAGQNSVVNANATFETPWQAIF-GARVAVSPKVTLNGQVTRMGWSK 301

Query: 296 FDKIEFRNLVTSRSSVGALTKGSYDKMYEWQDGWHYSIGGTYYLNSDWTLRAGYMY-DTS 354
           FD I           +GA    S  + Y  +D W ++ G  Y +   WT+RAG  +  T 
Sbjct: 302 FDAIR----------LGAPLNVSIPENY--RDTWSFAGGIDYAVTPAWTVRAGVQHAQTP 349

Query: 355 AQDSRTSISVPDSDRQWLSAGFTYNIDDKSNVDFGFTYLMGKDVAVSENDAGSKLTA 411
            ++      VPDS+R   +AG +Y +  +  +D G  Y+  KD  +    A    TA
Sbjct: 350 TRNGNRDARVPDSNRWNFAAGTSYAVSSRFTLDAGAAYITFKDTTIDRTTAAYAGTA 406