Pairwise Alignments

Query, 428 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., long chain fatty acid transport protein from Sphingobium sp. HT1-2

 Score =  150 bits (378), Expect = 1e-40
 Identities = 125/446 (28%), Positives = 199/446 (44%), Gaps = 61/446 (13%)

Query: 1   MNNMRLFKKSLLAVTVTLATQQAFAAGFQLNAQSATGLGRAFAGDAVIADNAAVMSRNPA 60
           M+  R    ++L     +A   A A GF L  QS    GRA AG A   D+ + +  NPA
Sbjct: 1   MSLRRRILPTILLTGAIVAPMPALAGGFYLQEQSPVETGRAMAGGAAAGDDPSTIYFNPA 60

Query: 61  AMALFDEMALSLGFETITTMIDVKNV-SYRGVLGNSVSVQDTDDVGGTSV-----APNIH 114
           AM     + +S G   +       N  SYR V G++  V  T + GG         PN +
Sbjct: 61  AMTQLSGVQVSAGVNALMASAHQTNRGSYRTVPGSTARVPVTGNDGGQPFESVIPVPNFY 120

Query: 115 LIVPVNEQFAWGVNAYSNFGTKTEFSDSYPASEYGGLTDVKSFNLGLAGSYRVNKEWSFG 174
               V ++   G+   + FG K E+ D +        TD+K++N+  + ++++N  +S G
Sbjct: 121 ASAQVTDRLWLGLGVNAPFGLKLEYDDGFFGRYDSIYTDLKTYNIQPSAAFKLNDNFSIG 180

Query: 175 AGLDLIYGQGTMKRIAGTSFPASTIVVNPTTVIPARGTSLLNVD-----KADGWAVGFNL 229
            G+D+ Y                 +  N T  +P + + L+  D     K D W VG+N 
Sbjct: 181 GGVDVQY-----------------VKANLTNALP-QVSPLVTTDGFTKLKGDDWTVGWNA 222

Query: 230 GTVYEMDENN-----RFGLSYR----------YSPEFKAKDDYGQEITLPLPDIAEFSGF 274
           G  Y     N     R G++++           +P   A  ++     L LPDI   S  
Sbjct: 223 GLFYTNGTTNVGVHYRSGINHKLKGTQTISGLVTPLSAANGEFDASAPLDLPDIVTVSFM 282

Query: 275 HKIENTQFAVHYSVQWIGWSAFDKIEFRNLVTSRSSVGALTKGSYDKMYEWQDGWHYSIG 334
           HK+     A+  + +W GWS+F  IE    VTS +       G+ +K  +++D +  S+G
Sbjct: 283 HKLTPNLRAM-ITGKWYGWSSFKGIE----VTSAT-------GTTNKELDYKDSYSVSLG 330

Query: 335 GTYYLNSDWTLRAGYMYDTS-AQDSRTSISVPDSDRQWLSAGFTYNIDD--KSNVDFGFT 391
           G Y  +  +TLRAG M+D S       +  VPD DR WL+ G T+NI      NV +  T
Sbjct: 331 GEYDFSPAFTLRAGTMFDRSPTNPQHLTTRVPDGDRVWLTGGATWNISPAFALNVAYAHT 390

Query: 392 YLMGKDVAVSEN--DAGSKLTATTHA 415
           ++   ++   ++   + + +TATT A
Sbjct: 391 WVEKANIIRPDSYFPSPATVTATTLA 416