Pairwise Alignments

Query, 428 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., putative Long-chain fatty acid transporter from Pseudomonas putida KT2440

 Score =  145 bits (367), Expect = 2e-39
 Identities = 105/417 (25%), Positives = 191/417 (45%), Gaps = 38/417 (9%)

Query: 5   RLFKKSLLAVTVTLATQQAFAAGFQLNAQSATGLGRAFAGDAVIADNAAVMSRNPAAMAL 64
           ++  K+ L V V LA+ Q FA+GF LN QS + +G  FAG +  A++A+ +  NPA M+ 
Sbjct: 3   KVMLKTSLGVAVALASSQLFASGFALNEQSISSMGTGFAGRSSSAEDASTVFGNPAGMSR 62

Query: 65  FDEMALSLGFETITTMIDVKNVSYRGVLGNSVSVQDTDDVGGTSVAPNIHLIVPVNEQFA 124
                 ++G   +    D+         G+++  +   D+      P  + + P+++ ++
Sbjct: 63  LKREQFTVGGAAVIAKTDISGP------GSNLGGETDGDMVPVVGVPMGYYVKPIDDHWS 116

Query: 125 WGVNAYSNFGTKTEFSDSYPASEYGGLTDVKSFNLGLAGSYRVNKEWSFGAGLDLIYGQG 184
            G   Y  FG  T++     A  +G  + V+        SY  N + S G G        
Sbjct: 117 VGFGIYVPFGLVTDYGSDDAARYWGKKSHVQVVTFQPTVSYAFNDKVSIGFG-------P 169

Query: 185 TMKRIAGTSFPASTIVVNPTTVIPARGTSLLNVDKADGWAVGFNLGTVYEMDENNRFGLS 244
           T+ RI G      + ++NP T  P R    + + K D  AVG+N+G + +  +  R GL+
Sbjct: 170 TINRIEG---ELGSSLINPFT--PGRNDGEVKI-KGDDTAVGYNIGILVQATDRTRVGLT 223

Query: 245 YR----YSPEFKAK-----------DDYGQEITLPLPDIAEFSGFHKIENTQFAVHYSVQ 289
           Y     Y  E K +           + +   + +  P+  + S  H++++ Q+ ++    
Sbjct: 224 YHSMVDYELEGKTRVSTPLIGPFNGNKFDASLKIKTPESVDLSVTHELDD-QWTLYAGST 282

Query: 290 WIGWSAFDKIEFRNLVTSRSSVGALTKGSYDKMYEWQDGWHYSIGGTYYLNSDWTLRAGY 349
           W  WS  + I  +N V +  +  A    +  +   W D W ++IG +Y +N +W LR G+
Sbjct: 283 WTRWSRLENITVQNDVPAPLAGSAFQ--TITEEQNWHDTWAHAIGASYKVNKEWVLRTGF 340

Query: 350 MYDTSAQDSR-TSISVPDSDRQWLSAGFTYNIDDKSNVDFGFTYLMGKDVAVSENDA 405
             D S  ++   S  +P  DR+  S G  ++ +D   +D  ++YL  +D  V++  A
Sbjct: 341 TVDQSPTNNHDRSPRIPTGDRRIFSLGAGWSPNDDMTIDVAYSYLWEEDTKVNQVSA 397