Pairwise Alignments

Query, 428 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., Putative outer membrane protein from Methylophilus sp. DMC18

 Score = 70.1 bits (170), Expect = 1e-16
 Identities = 90/429 (20%), Positives = 159/429 (37%), Gaps = 59/429 (13%)

Query: 19  ATQQAFAAGFQLNAQSATGLGRAFAGDAVIADNAAVMSRNPAAMALFDEMALSLGFETIT 78
           AT   F+ G+ + +Q   G+G A   DA+ A      + NPA M              + 
Sbjct: 21  ATDGYFSHGYSVRSQGVGGVGIALPQDALAA------AANPAGMG------------KVG 62

Query: 79  TMIDVKNVSYRGVLGNSVSVQDTDDVGGTSVA--------PNIHLIVPVNEQFAWGVNAY 130
           + +D     +R V  + +         GT           P +      +E    GV+ Y
Sbjct: 63  SRVDAGVTWFRPVRESEIEGSGAPGANGTYKGNDSQNFFIPELGYNTQYSEDVTLGVSVY 122

Query: 131 SNFGTKTEFSDSYPASEYGGL---TDVKSFNLGLAGSYRVNKEWSFGAGLDLIYGQGTMK 187
            N G  T++ +  P     G     D+    +    +++V +  + G  L+L Y +   K
Sbjct: 123 GNGGMNTDYKNGIPLFNSNGRRTGVDLAQVFVAPTATWKVQEHHTLGVSLNLAYQRFEAK 182

Query: 188 RIAGTSFPASTIVVNPTTVIPARGTSLLNVDKADGWAVGFNLGTVYEMDENNRFGLSYR- 246
            +   S  +S+              +L N    D + VG ++G + E+ +    G +Y+ 
Sbjct: 183 GLQNFSNASSS------------SANLTNNGHDDSYGVGVHIGWLGEITDAVTLGATYQS 230

Query: 247 --YSPEF-KAKDDYGQEITLPLPDIAEFSGFHKIENTQFAVHYSVQWIGWSAFDKIEFRN 303
             Y   F K K  + ++    +P         K+      +    Q I +S  D +   +
Sbjct: 231 RTYMSRFDKYKGLFAEQGDFDIPSTYGVGVAVKV-TPALTLAADFQRINYSEVDAVGNAS 289

Query: 304 LVTSRSSVGALTKGSYDKMYEWQDGWHYSIGGTYYLNSDWTLRAGYMY---DTSAQDSRT 360
           L    + +G      ++    WQD   Y IG  Y  +    LRAGY +      A D+  
Sbjct: 290 LSNLSNGLGNDNGAGFN----WQDAKVYKIGALYQYSPALILRAGYNHVDQPIRAGDTLF 345

Query: 361 SISVPDSDRQWLSAGFTYNIDDKSNVDFGFTYLMGKDV----AVSENDAGSKLTATTHAD 416
           +I  P   +  +S G T+ +  +S V F +T+     V    ++     G       + D
Sbjct: 346 NILAPGVVKDHVSIGATWVLSPQSEVSFAYTHAFENTVRGQNSIPAGFGGGDANVRMYQD 405

Query: 417 AILLGLQYS 425
           A  LG+ Y+
Sbjct: 406 A--LGVAYT 412