Pairwise Alignments

Query, 428 a.a., long-chain fatty acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., outer membrane protein transport protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score = 89.7 bits (221), Expect = 2e-22
 Identities = 116/413 (28%), Positives = 169/413 (40%), Gaps = 68/413 (16%)

Query: 23  AFAAGFQLNAQSATGLGRAFAGDAVIADNAAVMSR--NPAAMALFDEMALSLGFETITTM 80
           A A  F +  QS  G GRA AG   +  +  V S   NPAA+A   +  + +G   +   
Sbjct: 26  AMAGSFYVQEQSTRGQGRANAG---VGADKGVQSLWWNPAAIA-GTQREVYVGMHGLILD 81

Query: 81  IDVKN----VSYR----------GVL--GNSVSVQD--TDDVGGTSVAPNIHLIVPVNEQ 122
            DV N    +SY           G +  G++V   D    DV  + + PN  + +P+ ++
Sbjct: 82  SDVDNRGSTLSYNLPAPTPPFPAGTILSGSTVVAGDPHVHDVVESGIVPNFAVSMPIGDR 141

Query: 123 FAWG--VNAYSNFGTKTEFSDSYPASEYGGLT-DVKSFNLGLAGSYRVNKEWSFGAGLDL 179
           F  G  V A  NF TK E  D    + Y  LT +++S N+ L  +  V      GAG D 
Sbjct: 142 FNVGLAVQAPYNFTTKYEQPDF---ARYDALTSELRSANVSLVAAMTVTDWLDIGAGFDA 198

Query: 180 IYGQGTMKRIAGTSFPASTIVVNPTTVIPARGTSLLNVDKADGWAVGFNLGTVYEMDENN 239
            Y + T+   A  + P +   V P  +IP+  T   N  + DGW  G+N G      + +
Sbjct: 199 QYAKATLSS-ALPNLP-TVAGVAPLVLIPS-ATDGRNQLEGDGWDYGWNAGAQMHFGKLD 255

Query: 240 RFGLSYRYSPEFK------------------AKDDYGQEITLPLPDIAEFSGFHKIENTQ 281
             GLSYR   E +                     D G   T P    A  S  + + N +
Sbjct: 256 -LGLSYRSKIEHELEGSVNISGLTGVLAGANVSTDGGASFTTPW--YATVSARYAV-NDR 311

Query: 282 FAVHYSVQWIGWSAFDKIEFRNLVTSRSSVGALTKGSYDKMYEWQDGWHYSIGGTYYLNS 341
             ++  V  IGWS FD I             A T G    + ++ D    +IG  Y ++ 
Sbjct: 312 LTLNAQVNQIGWSEFDAIRV-----------AYTGGGSTIVQDYDDVTTGAIGFDYKIDP 360

Query: 342 DWTLRAGYMYD-TSAQDSRTSISVPDSDRQWLSAGFTYNIDDKSNVDFGFTYL 393
             T RAG  YD T   D   +  +PD DR   +AG +  I   +  D   TY+
Sbjct: 361 SMTFRAGLGYDPTPTPDDHRTARIPDGDRWLYAAGLSKTIGSMT-FDGAVTYI 412