Pairwise Alignments

Query, 432 a.a., aromatic hydrocarbon degradation protein from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., aromatic hydrocarbon degradation membrane protein from Sphingobium sp. HT1-2

 Score =  115 bits (289), Expect = 2e-30
 Identities = 108/422 (25%), Positives = 177/422 (41%), Gaps = 44/422 (10%)

Query: 7   LLSCAVAFGLASVSTFTQAAGFQLAEYSATGLGRAYAGEAAMADNASAQWRNPAMLTYLE 66
           + + AVA GL +      A  F L E S+ G GRA++GE A      + W NPA +  +E
Sbjct: 10  IATSAVAAGLLAPQA-ASAQAFYLQEQSSRGAGRAFSGEVA-DQGVQSLWWNPAAIAGME 67

Query: 67  GTQVSAGAIYVNPNVDVEGTVNH--AQLGKTHAS------SNDFAHDAVIPNFYLSHQLN 118
           G         + P   V+  VN    + G++ A+      S D  ++ V+P+  ++  L 
Sbjct: 68  GVDAHQAVSVILPKGSVDN-VNTLIVRPGQSAAAVGGSQRSRDPINNGVLPSGAIAVGLT 126

Query: 119 EQMALGFALGTNYGMETDLGTEFAASHFGNQASVISKEANLNIAYQILPQLSIGGGVRYV 178
            ++ALG  + + Y   T+   +  A +  ++  + + +   +IAY + P LSIG  +   
Sbjct: 127 SRLALGLTVASPYSFTTNYDADSWARYSADKTKLRTYDIQPSIAYLVTPNLSIGAALNIE 186

Query: 179 MGEGHFGATAPAKNLIRHPVTNNVMTLPKGTTLKYMEGEDNSW--GWQVGSAWQINQDHR 236
             +       P          N    L  G    + E + N W  GW  G  ++     +
Sbjct: 187 YADASLSNYLP----------NLSPLLADG----HQELKGNGWDLGWSAGLQYRAGP-MQ 231

Query: 237 VGFAYKSEVVMDFEGHAEGVSYGSYKPGMMSVT-------LPATAELASFHQLNDQWAIH 289
           +G +YKS V  + +G            G  SV         P  A   +   ++ +  ++
Sbjct: 232 LGASYKSSVKHNLDGSVTTTGLLGPLAGQNSVVNANATFETPWQAIFGARVAVSPKVTLN 291

Query: 290 ASINWTDWSSFKELTAVFPEKSDLIKSENWEDNYRFALGTTYQYDAKLALRAGVAYDTSA 349
             +    WS F  +    P    +   EN+ D + FA G  Y       +RAGV +  + 
Sbjct: 292 GQVTRMGWSKFDAIRLGAPLNVSI--PENYRDTWSFAGGIDYAVTPAWTVRAGVQHAQTP 349

Query: 350 VDDKNRTATIPETDRTWVSVGGSYVATPQLTLDAGFTYIFAKDATINEPRDASDQTAAAI 409
             + NR A +P+++R   + G SY  + + TLDAG  YI  KD TI       D+T AA 
Sbjct: 350 TRNGNRDARVPDSNRWNFAAGTSYAVSSRFTLDAGAAYITFKDTTI-------DRTTAAY 402

Query: 410 GG 411
            G
Sbjct: 403 AG 404