Pairwise Alignments

Query, 703 a.a., AsmA family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 66.6 bits (161), Expect = 4e-15
 Identities = 59/255 (23%), Positives = 115/255 (45%), Gaps = 24/255 (9%)

Query: 415 DLSALKALDVAGEISIDKFKASNAHLQNVKANFAVNRGVVDLKSFTANLYQGSVQAS--- 471
           DLSAL A D+   +S  +    +  L  V A+  ++ G + L    A+ + G ++AS   
Sbjct: 345 DLSALSACDLDLRLSAARVDVGDTALSTVAASAVLSAGRLVLAIGEAHGWGGVLRASLTL 404

Query: 472 --AQVDA------RKTPATYSVKKQIKGVQVKPLLKDVLNNEMLEGTGNIDVNVQGQSLT 523
             A  DA      R   A   ++ +   V++   L D+     ++GTG + V+V G   +
Sbjct: 405 APAPPDAAAPQAHRSAGAELRLEAEATDVELARALDDIGGFRRIDGTGTLQVDVTGAGRS 464

Query: 524 PSGIQKNLVGTVAINFADGAVKGINVAHLIRTHYAKIKGQNVEEADAVK--KTDFSAMTT 581
              I  NL G+  +  A+G + G +VA L++    +I+ + +      +  +T F+ ++ 
Sbjct: 465 IQDIAANLQGSAGLTAANGYLTGFDVAQLLQ----RIERRPLSATSDWRGGRTAFTEISG 520

Query: 582 TLKLNKGEVTTNDLNMQSPLLRIHGEGKANYLQQNVDFLVRTSIVGTLEGQGGKSLDELR 641
            + ++ G  T  +L M+ P  +I   G  +  Q+ +D     ++  T   + G       
Sbjct: 521 RIAISDGVGTVEELAMRGPRAQIEMTGSLSIAQRALDLAGHAALPQTKGTKTGA------ 574

Query: 642 DVTIPINISGAWSDP 656
            + +P ++ G W +P
Sbjct: 575 -IDLPFSVRGPWDEP 588



 Score = 28.1 bits (61), Expect = 0.001
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 6/49 (12%)

Query: 562 GQNVEEADAVKKTDFSAMTTTLKLNKGEVTTNDLNMQSPLLRIHGEGKA 610
           GQ+++  + V + D       L+L  G V  ND+ ++ P L + GEG A
Sbjct: 86  GQSLDAENVVTRLDL------LQLVAGRVAVNDVIVEHPTLVLTGEGMA 128



 Score = 26.9 bits (58), Expect = 0.003
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)

Query: 7  SLLGL-VVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPSIGFEL 65
          S+LG    L++ A+  L  LV   + + +  +     TG  + I G+   + FPS    L
Sbjct: 17 SVLGAGAALLLVAMAVLPFLVPAAELRRVAAQALAGSTGQKVEILGEPSIRLFPSPRVVL 76

Query: 66 GKTELKNPQG 75
          GK     P G
Sbjct: 77 GKVSFPLPAG 86