Pairwise Alignments

Query, 703 a.a., AsmA family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 736 a.a., cell envelope biogenesis protein AsmA from Pseudomonas simiae WCS417

 Score =  161 bits (407), Expect = 1e-43
 Identities = 167/750 (22%), Positives = 317/750 (42%), Gaps = 70/750 (9%)

Query: 2   KKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPSI 61
           K L + LLGL+++IV    AL  L +PN +K  I + A+ +  ++L + GDIGW  FP +
Sbjct: 6   KILGLVLLGLLLIIVALGFALTHLFDPNDYKDEIRQIARDKAHIELTLNGDIGWSLFPWL 65

Query: 62  GFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKDG 121
           G EL +  +        P    ++ +G+ V V+PLL +++++ ++R++G    L   K G
Sbjct: 66  GLELHEASVATLTAPTQP-FADLQMLGLSVRVLPLLRREVQMSDVRVEGLNLRLNRDKQG 124

Query: 122 RSNLDALTQAQSKPA-SAPATTDSAPASQPSSSEPAAAWSIELGGVSVSNAVLEITDKKA 180
             N + + +  ++    +P + +    ++P   +P+    +++  ++++NA +E  D++ 
Sbjct: 125 HGNWEDIGKNVTEATVGSPGSVEQPAETEPE--KPSKPIRLDIDSLTINNARVEYNDEQT 182

Query: 181 GSHTKLYDVQLSVAEF-----VPDNWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYA 235
           G       +QLS         +P    K T     ++   +   +    +R+    K+Y 
Sbjct: 183 GKQFSAESIQLSAGAVHEGASIP---VKLTAFFGSNQPVMRVKTELNGNLRIQRALKRYQ 239

Query: 236 LRNINLDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAAD---MKLNA---QGSA 289
             ++ +       + +     L+  T  F     L    A   A+   +KL+A   +   
Sbjct: 240 FEDMKI-------TGEATGEPLQGKTVTFSTQGQLLVDQAANIAEWTNVKLSANQLRALG 292

Query: 290 SLMVN------QAISKVGLDALKLQAELEGAALPQSPM------KLSLDSQIAFDLTQNH 337
            L VN      Q    + +    L   L+G   P  PM      K+ L S++    T   
Sbjct: 293 ELKVNDLDKTPQLSGALSIAQFDLAKFLDGVGHPLPPMAEGSLSKVELVSRLKGTPTSLA 352

Query: 338 LSVLLNKLTANALSFDGKADVTLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAA 397
           L  L  KL  +  +F G+  V       +R  L     + D +L  K++ ++ A A   A
Sbjct: 353 LEDLNLKLDGS--TFTGRLAVEDFAKQSLRVQLKGDTFNADNYLPAKSESAKGAAAARQA 410

Query: 398 ----------ASSSSAPATNAPAEVEPD------LSALKALDVAGEISIDKFKASNAHLQ 441
                     A+  + P  +AP +          L+ L+ LDV  +++  +   S   +Q
Sbjct: 411 EVQNSEAGAMAAGGTTPLPDAPTKGAWSTDKLLPLTRLRTLDVNADLAFGQLTLSKLPIQ 470

Query: 442 NVKANFAVNRGVVDLKSFTANLYQGSVQASAQVDARKTPATYSVKKQIKGVQVKPLLKDV 501
           N     +   G + L + +  LY GS QA+  +D R+     +++  IK V V+ +L+  
Sbjct: 471 NAVLKASGVDGQLKLDTLSGGLYNGSFQANGTLDVRQDIPVLALQSHIKQVPVERILQAQ 530

Query: 502 LNNEMLEGTGNIDVNVQGQSLTPSGIQKNLVGTVAINFADGAVKGINVAHLIRTHYAKIK 561
             N  ++G   +D N+ G+  +   +  +L GT +    +G +   N+   + T  A + 
Sbjct: 531 GQNPPVKGQVTLDSNLTGRGNSQKALIDSLNGTASFVINNGVLLNANLEQQLCTGIALLN 590

Query: 562 GQNVEEADAVKKTDFSAMTTTLKLNKGEVTTNDLNMQSPLLRIHGEGKANYLQQNVDFLV 621
            + +      K T F  +   L    G  +  DL ++ P L ++G G  +     +D+  
Sbjct: 591 RKTLSSTPQGKDTPFQELKGNLTFRNGVASNPDLKVRIPGLTVNGNGDVDLRVLGMDY-- 648

Query: 622 RTSIVGTLEGQGGKSLD-------ELRDVTIPINISG--AWSDPKFRLVFDDVLKQKAKK 672
           R  I+  +EG   ++ D         + + +P+   G         RL  D + +   K 
Sbjct: 649 RVGII--VEGDQRETPDPACQVGSNFQGIEVPLRCRGPLELGAKACRLDKDGLGQVAIKA 706

Query: 673 EVDRGVEKLTDKIKDEDTKKAVDGLLKGLF 702
             +R  EKL +K+  +     +   LKGLF
Sbjct: 707 AGNRLNEKLEEKL--DKVNPQLKDALKGLF 734