Pairwise Alignments

Query, 703 a.a., AsmA family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 611 a.a., outer membrane assembly protein AsmA from Serratia liquefaciens MT49

 Score =  186 bits (471), Expect = 4e-51
 Identities = 153/701 (21%), Positives = 300/701 (42%), Gaps = 94/701 (13%)

Query: 1   MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60
           M++L  +L+ L+V++V  + ALVLLVNPN F+  +V + ++++G  L ++G++ W  +P 
Sbjct: 1   MRRLLTTLVILLVVLVAGMSALVLLVNPNDFRAYMVTKVEQKSGYHLTLDGELRWHIWPQ 60

Query: 61  IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120
           +    G+  L  P G  +P +   +++ +DV ++PLL  QL +  + L  A   L     
Sbjct: 61  LSILAGRMTLTAP-GATAP-VVSADNMRLDVKLLPLLSHQLFVKQVMLKNAVIRLTP--- 115

Query: 121 GRSNLDALTQAQSKPASAPATTDSAPASQPSSSEPAAAWSIELGGVSVSNAVLEITDKKA 180
                D+  Q Q     APA      A  P        W  ++  + V +++L I  +  
Sbjct: 116 -----DSEEQTQPDAPIAPAGHSEESAEAP--------WKFDIDNLRVVDSLL-IWQRAN 161

Query: 181 GSHTKLYDVQLSVAEFVPDNWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 240
                + D+ L++                                      +Q A R   
Sbjct: 162 NEQINVRDINLTL--------------------------------------QQNAKRQAQ 183

Query: 241 LDASFSDPSNQIDSAKLKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLMVNQAISKV 300
           ++ S     NQ D                L+FS+A             A + + Q   ++
Sbjct: 184 MELSSRVNRNQRD----------------LSFSMA-------------ADIDLQQFPRRI 214

Query: 301 GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVLLNKLTANALSFDGKADVTL 360
             +  +   +LEGA +    +K    +Q+ +  T   +++    ++AN  +F G AD+  
Sbjct: 215 AANVSQFSYQLEGADILAGGIKGEGSAQVVYQQTPQQVALSQLSVSANDSTFTGDADIKF 274

Query: 361 ADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPATNAPAEVEPDLSALK 420
            +IP    NL S  ++LD F G +A  SQ  P++   ++   A   + P   + +L  L+
Sbjct: 275 GEIPAYTLNLASTVLNLDTFTGWQASSSQAQPSQVVTSAPVIASQMDDP---QHNLEVLR 331

Query: 421 ALDVAGEISIDKFKASNAHLQNVKANFAVNRGVVDLKSFTANLYQGSVQASAQVDARKTP 480
             +    +S+D+      ++ ++       +G++   S +  L  G       +DAR + 
Sbjct: 332 DFNAQLNLSVDQLTYRGMNIAHLVLQADNRQGLLTSHSLSGQLAGGDFALPGTLDARGSR 391

Query: 481 ATYSVKKQIKGVQVKPLLKDVLNNEMLEGTGNIDVNVQGQSLTPSGIQKNLVGTVAINFA 540
              +V+  +K V++  +LK     ++L G  ++  ++ G   T    ++   GT  +   
Sbjct: 392 PVITVQPVVKQVELGTVLKAFEMPQVLTGKFSMQGDLTGDRFTSQSFERRWQGTAQMTMQ 451

Query: 541 DGAVKGINVAHLIRTHYAKIKGQNVEEADAVKKTDFSAMTTTLKLNKGEVTTNDLNMQSP 600
           D  + G+N+  LI+   A+       + +  + T+   ++    LN+G V   +L   SP
Sbjct: 452 DAQLHGLNIQQLIQQAVARNDSSVRGQDEYQRYTEVKQLSAKASLNRGTVKITELGADSP 511

Query: 601 LLRIHGEGKANYLQQNVDFLVRTSIVGTLEGQGGKSLDELRDVTIPINISGAWSDPKFRL 660
           LL + G G  +   +  D  +   + G  +G+    + +L+   IP+ + G W+   ++L
Sbjct: 512 LLNLSGGGTVDMPGKQCDMALNVRVTGGWQGR-DDLIQQLQKTPIPLRVYGPWNQLNYQL 570

Query: 661 VFDDVLKQ----KAKKEVDRGVEKLTDKIKDEDTKKAVDGL 697
             D +L++    +AK  +++  EK  D  + +D KK +D L
Sbjct: 571 QVDQILRKTLQDRAKDALNKWAEKNQDSREGQDLKKLLDKL 611