Pairwise Alignments

Query, 683 a.a., methionine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 698 a.a., Methionyl-tRNA synthetase (EC 6.1.1.10) from Variovorax sp. SCN45

 Score =  720 bits (1858), Expect = 0.0
 Identities = 380/702 (54%), Positives = 478/702 (68%), Gaps = 32/702 (4%)

Query: 5   PRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQ 64
           PRKL VT ALPYANG  H+GHM+E+IQADIWVR QR+ G  VNF+CADDAHG  I + A 
Sbjct: 4   PRKLFVTTALPYANGKFHIGHMMEYIQADIWVRNQRMNGADVNFVCADDAHGAAITIAAD 63

Query: 65  QMGMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRT 124
           + G+TP+A +  ++   +    G+ I+FDN+HST + EN +LA  IY  L+ NG I++++
Sbjct: 64  KAGVTPQAFVAEIAAGRKPYLDGYHIAFDNWHSTDAPENHQLAQDIYRDLRANGLIATKS 123

Query: 125 ISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPV 184
           + Q +DP+K MFL DRF+KG CP C S+DQYGDNC+ CG  Y+PTELINP SA+SGA P 
Sbjct: 124 VEQFYDPQKGMFLADRFIKGECPNCHSKDQYGDNCEVCGAVYAPTELINPYSALSGAKPE 183

Query: 185 MKDSEHFFFDL--PQFESMLKEWTRS-GSLQSETANKMQEWF------EGGLQQWDISRD 235
           ++ SEHFFF L  P+ E+ LKEWT + G +Q E  NK++EW       +GGL  WDISRD
Sbjct: 184 LRSSEHFFFKLSDPRCEAYLKEWTAAPGHVQPEVQNKIREWLYKDDEGKGGLGDWDISRD 243

Query: 236 APYFGFEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKR-----GD-LDFNEYWNKDSKTEL 289
           APYFG EIP    K+FYVWLDAP+GY+ S KNL DKR     GD + + EY   D + E 
Sbjct: 244 APYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLDKRCIELGGDGISYTEYM-ADPELEQ 302

Query: 290 YHFIGKDIVYFHSLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLN- 348
            HFIGKDI+ FH+LFWPAML  SG + P  V+VHG++TV+G KMSKS+GT +    YL+ 
Sbjct: 303 VHFIGKDIITFHTLFWPAMLHFSGRKAPNAVYVHGHLTVSGEKMSKSRGTGIDPLKYLSI 362

Query: 349 HLDPECLRYYYAAKLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKL 408
            LDPE LRYY AAKLN R +D+D N EDF  RVN+D+V K +N+ASR AGFI KRF GKL
Sbjct: 363 GLDPEWLRYYIAAKLNGRNEDIDFNPEDFVARVNSDLVGKYINIASRAAGFIGKRFGGKL 422

Query: 409 SAHFAEPE-LYAEFAGAADRIAELFEAREFGRAIREITALADKANQYVDEKAPWVVAKQE 467
               A+ + L      AA +I  L++ R++ RA+RE+ ALADK N+YVD+  PW +AK+E
Sbjct: 423 GEVSADGDALLFTLRDAAQQIHSLYDGRDYARALREVMALADKVNEYVDQNKPWELAKKE 482

Query: 468 GQDQALQDICTVGINLFRVLMTYLKPVMPALAERTEAFL-NQELTWEGVATPL-TDHAVT 525
           G +  L D+CTV I  FR+L  YLKPV+PALA   EAFL    L W      L   HA+ 
Sbjct: 483 GAEARLHDVCTVCIEAFRLLTLYLKPVLPALALNVEAFLKTSPLVWADATQSLPAGHAIG 542

Query: 526 PFKALFNRIDPKQVEAMIEASKAEAAAEKAAADAAKPKSAETELSKDPLAAEIEFDDFAK 585
            +K L  R DPKQV+ + +A +A AAA   A  A +    E       +A  I  DDFAK
Sbjct: 543 DYKHLMQRADPKQVDKLFDAPEA-AAAPAVATQAQELPGGEA------IAPTITIDDFAK 595

Query: 586 VDLRIAKILSCEAVEKSDKLLKFELDIG-GETRQVFSGIKSAYQPEDLIGKYTVVVANLK 644
           +DLRIAKI++CE VE S KLL+  LD G G+TR VFSGI SAYQPE L+GK TV+VANL 
Sbjct: 596 IDLRIAKIVACEKVEGSTKLLRLTLDAGEGKTRNVFSGIASAYQPEQLVGKLTVLVANLA 655

Query: 645 PRKMKFGMSEGMILAAGPGGS----DLWLLEPHQGAQAGMRV 682
           PRKMKFG+SEGM+LAA  G       + +LEP  GA  GMRV
Sbjct: 656 PRKMKFGVSEGMVLAASHGDEKAHPGIHVLEPWPGATPGMRV 697