Pairwise Alignments

Query, 683 a.a., methionine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 516 a.a., methionyl-tRNA synthetase from Agrobacterium fabrum C58

 Score =  179 bits (453), Expect = 4e-49
 Identities = 134/506 (26%), Positives = 228/506 (45%), Gaps = 44/506 (8%)

Query: 4   DPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKA 63
           D     +T A+ Y NG  H+GH  E I  D   R+QRL G  V F+   D HG  +   A
Sbjct: 3   DKTPFYITTAISYPNGKPHIGHAYELIATDAMARFQRLDGMDVFFLTGTDEHGQKMQQTA 62

Query: 64  QQMGMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSR 123
           +  G++PE + +  S++ +      + S D++  T  + + E + +I+  +  +G I   
Sbjct: 63  RAEGISPEELAQRNSDQFREMGKLLNASNDDFIRTTEERHHETSRNIWNLMADSGDIYKD 122

Query: 124 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATP 183
           + +  +    E +              +ED+     D  G  Y P             TP
Sbjct: 123 SYAGWYSVRDEAYY-------------AEDETEVRAD--GVRYGPQ-----------GTP 156

Query: 184 V-MKDSEHFFFDLPQF-ESMLKEWTRSGSL--QSETANKMQEWFEGGLQQWDISRDAPYF 239
           V   + E +FF L ++ E +LK +  +      +E  N++  + + GL+   ISR    +
Sbjct: 157 VEWVEEESYFFKLSEYQEKLLKLYEENPDFIGPAERRNEIISFVKSGLKDLSISRTTFDW 216

Query: 240 GFEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIVY 299
           G ++P +     YVW+DA   Y+ +   + D+ G     +YW  D      H IGKDI+ 
Sbjct: 217 GIKVPDDPKHVMYVWVDALTNYITATGYIEDRNGPRA--KYWPAD-----VHIIGKDIIR 269

Query: 300 FHSLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYY 359
           FH+++WPA L  +    P  V+ HG++   G KMSKS G  V  +  + H   + +RY++
Sbjct: 270 FHAVYWPAFLMSAKLPLPKRVYAHGFLLNKGEKMSKSLGNVVDPANLVAHFGLDPVRYFF 329

Query: 360 AAKLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFA----EP 415
             +++    D   + E    R+NAD+ N I NLASR+   I K  DG++    A    + 
Sbjct: 330 MREVSFG-QDGSYSEEGIATRINADLANGIGNLASRSLSMIVKNCDGQIPTPGAFNDDDK 388

Query: 416 ELYAEFAGAADRIAELFEAREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQD 475
            + A   G      E    +   RA+  I A+  + ++Y   + PW + K +   + +  
Sbjct: 389 AMLASADGLLAVCREEMGKQLIHRALAAIIAVVSETDRYFASQEPWALKKTD--PERMGT 446

Query: 476 ICTVGINLFRVLMTYLKPVMPALAER 501
           +  V   + R +   L+P MP   E+
Sbjct: 447 VLYVTAEVVRQIGILLQPFMPQSCEK 472