Pairwise Alignments

Query, 324 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  107 bits (268), Expect = 3e-28
 Identities = 62/177 (35%), Positives = 94/177 (53%), Gaps = 2/177 (1%)

Query: 139 EKLAQHQLELEHLTHMDHLTQVYNRYAMDSLLPQALDIARLDRVSSALLMIDIDCFKEYN 198
           ++L    L L+ L + D LT + NR   D  L      A  D+   +LLMID+D FK YN
Sbjct: 155 QQLLDTNLVLQRLMNSDGLTGLSNRRHFDEYLELEWRRAMRDQTQLSLLMIDVDFFKTYN 214

Query: 199 DGYGHIQGDDVLRKVSQTLRQWKSN-LDLCFRYGGDEFLIFMTRVDAKQCQQRAEKLMAM 257
           D +GH++GD+ LRKV+  +R+  S   DL  RYGG+EF + +        +  AEKL   
Sbjct: 215 DSFGHVEGDEALRKVAAAIREASSRPSDLPARYGGEEFALVLPNTSPGGARLVAEKLRMA 274

Query: 258 IHELNIPHLSSRVADHVTITVGIRHCDQIEKEMTAEKLVLVADKALFHAKHEQRGTI 314
           +  L IPH +      +TI++G+     ++      +L++ ADK L+ AKH  R  +
Sbjct: 275 VAALKIPHNAPTEGSSLTISIGLSTLTPVQ-GTDCRQLIMAADKGLYTAKHNGRNQV 330