Pairwise Alignments

Query, 324 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 574 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score = 89.0 bits (219), Expect = 3e-22
 Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 7/173 (4%)

Query: 135 KHTVEKLAQHQLELEHLTHMDHLTQVYNRYAMDSLLPQALDIARLDRVSSALLMIDIDCF 194
           K     L     EL+     D LT + NR+ M+  L QAL ++  D     ++MIDID F
Sbjct: 396 KERTAALETANAELDRQARFDALTGLLNRHGMEERLQQALAVSNPDTAPLGIVMIDIDHF 455

Query: 195 KEYNDGYGHIQGDDVLRKVSQTLRQWKSNLDLCFRYGGDEFLIFMTRVDAKQCQQRAEKL 254
           K  ND +GH  GD VL+ V+  ++      D+  R GG+EF++ +   +A +  Q A  L
Sbjct: 456 KSVNDRFGHATGDLVLKAVAGLMKSRLRKSDIAARLGGEEFVLMLPGANAAEAMQTATDL 515

Query: 255 MAMIHELNIPHLSSRVADHVTITVGIRHCDQIEKEMTAEKLVLVADKALFHAK 307
           + ++ E  I  +      H+TI+ G+     + ++ +    +  ADKAL+ AK
Sbjct: 516 VRLVGEAFIDPVG-----HITISCGV--SQMLREDDSVASALRRADKALYAAK 561