Pairwise Alignments

Query, 296 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., Putative structural protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  295 bits (754), Expect = 1e-84
 Identities = 158/295 (53%), Positives = 206/295 (69%), Gaps = 3/295 (1%)

Query: 2   SLYENKKVVAIGGGHGLGRMLAALKVFGSNATGIVTTTDNGGSTGRIRHCQGGIAWGDTR 61
           +L +  +VVA+GGGHGLGR+L++L   GS  TGIVTTTDNGGSTGRIR  +GGIAWGD R
Sbjct: 5   TLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDMR 64

Query: 62  NCINQLITEPSISSMMFEYRFKGAGELNGHNLGNLMLTALDNLSVRPLDAINLIRNMLKV 121
           NC+NQLITEPS++S MFEYRF G GEL+GHNLGNLML ALD+LSVRPL+AINLIRN+LKV
Sbjct: 65  NCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRNLLKV 124

Query: 122 DVNILPMSEHPSDLAALAMDGKWVTGETSVDEMTQDLRRLDLAPEVPATKEAVTAIQDAD 181
           D  ++PMSE P DL A+   G  + GE ++D++    + + L P VPAT+EAV AI DAD
Sbjct: 125 DAQLIPMSELPVDLMAIDDQGHEIYGEVNIDQLATPPQEIMLTPNVPATREAVQAINDAD 184

Query: 182 CVILGPGSFLTSVMPPLLLPELGKAIARNQTAKVIFVENLSPEYG-PAGRMSLEQKLEWC 240
            +++GPGSF TS+MP LLL EL +A+ R   A ++++ NL  E   PA  ++L  KL   
Sbjct: 185 LILIGPGSFYTSLMPCLLLDELAQAL-RRTPAPMVYIGNLGRELSLPAASLTLVDKLAMM 243

Query: 241 ERACQGRKID-VVLGHHPHPELEQRWNFVTRDLASANRDWRHDRQKLRQAIEEQL 294
           E+    + ID VV+G             +   L +++  +RHDRQ L  A+E+ L
Sbjct: 244 EQYIGKKVIDAVVVGPRVDVSAVNDRLVIQEVLEASDIPYRHDRQLLHNALEKAL 298