Pairwise Alignments

Query, 296 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., uridine diphosphate-N-acetylglucosamine-binding protein YvcK from Dickeya dianthicola ME23

 Score =  286 bits (732), Expect = 4e-82
 Identities = 157/295 (53%), Positives = 205/295 (69%), Gaps = 9/295 (3%)

Query: 2   SLYENKKVVAIGGGHGLGRMLAALKVFGSNATGIVTTTDNGGSTGRIRHCQGGIAWGDTR 61
           +L E  +VVA+GGGHGLGR++++L   G   TGIVTTTDNGGSTGRIR  +GGIAWGDTR
Sbjct: 5   TLAELDRVVALGGGHGLGRVMSSLSFLGPRLTGIVTTTDNGGSTGRIRRSEGGIAWGDTR 64

Query: 62  NCINQLITEPSISSMMFEYRFKGAGELNGHNLGNLMLTALDNLSVRPLDAINLIRNMLKV 121
           NC+NQLIT PS++S MFEYRF G GEL+GHNLGNLML A+D+LSVRPL+AINLIRN+LKV
Sbjct: 65  NCLNQLITAPSMASAMFEYRFSGNGELSGHNLGNLMLKAMDHLSVRPLEAINLIRNLLKV 124

Query: 122 DVNILPMSEHPSDLAALAMDGKWVTGETSVDEMTQDLRRLDLAPEVPATKEAVTAIQDAD 181
           D  ++PMSE P DL A+   G  V GE +VD++    + L L P  PAT+EA+TAI +AD
Sbjct: 125 DALLIPMSEQPVDLMAIDALGNPVYGEVAVDQLAALPQDLMLYPTAPATQEALTAIAEAD 184

Query: 182 CVILGPGSFLTSVMPPLLLPELGKAIARNQTAKVIFVENLSPEYGP-AGRMSLEQKLEWC 240
            +++GPGSFLTS+MPPLLL +L +++  +  A V+++ NL  E    A R++L QKL+  
Sbjct: 185 LILIGPGSFLTSLMPPLLLTDLAQSL-HHAHAPVVYIGNLGDEQSQIATRLTLAQKLQLI 243

Query: 241 ERACQGRKIDVVLGHHPHPELEQRW----NFVTRDLASANRDWRHDRQKLRQAIE 291
           E     R ID V+     P  + R       + + L + +    HDR  LR A+E
Sbjct: 244 ESKIDRRIIDAVV---VAPRTDTRGVDDRLIIQQPLGAQDVPHHHDRVLLRAALE 295