Pairwise Alignments

Query, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., sigma-54 dependent transcriptional regulator from Rhodanobacter sp000427505 FW510-R12

 Score =  283 bits (723), Expect = 1e-80
 Identities = 161/450 (35%), Positives = 259/450 (57%), Gaps = 8/450 (1%)

Query: 1   MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLY 60
           +++D   +  L    L  +D+ ++ VGT  +A  ++  R  DL   D+RLPD TG +++ 
Sbjct: 8   VIDDERDIRELLTITLGRMDLQVDAVGTVAEARRALAERSYDLCFTDMRLPDGTGHEIIE 67

Query: 61  AVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKASKLKN 120
            +  + PD+P+  +TA+G++D AV A++ GA DF+ KP +   LR  V  A+R A + ++
Sbjct: 68  LIAAEHPDMPVAMITAYGNVDAAVNALKAGAFDFVSKPVDIQMLRGLVRTALRLAEERRS 127

Query: 121 DVDN-KNQNYQGFIGSSQTMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIHAASKR 179
                K  +    IG S  MQ V  TI   A ++A ++I GESG GKE+ A  IH    R
Sbjct: 128 GAAAAKTGDSSRLIGDSSAMQQVRATIAKLARNQAPVYIAGESGVGKELVARLIHEQGPR 187

Query: 180 GDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELCEMDLD 239
              PF+ +NC AIP +L+ESE FGH KG+FTGA+T+++G  +AA GGTLFLDE+ E+ L 
Sbjct: 188 ASGPFVPVNCGAIPSELMESEFFGHRKGSFTGASTDKEGLFQAAQGGTLFLDEVAELPLH 247

Query: 240 LQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLH 299
           +Q KLLR IQ    + +G      VD R + AT+++  + V++G+FR+DL+YR+ VI L 
Sbjct: 248 MQVKLLRAIQEKAVRPIGGRDEIPVDARILSATHKNLGQLVEQGQFRQDLFYRINVIELR 307

Query: 300 LPPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYEWPGNVRQLQNVLRNV 359
           +PPLR R  DV +++  +L  ++ + G+   +LS         Y++PGNVR+L+N+L   
Sbjct: 308 VPPLRERRGDVSQLSAFILKALAGKSGESVGQLSPSARGALEAYDFPGNVRELENILERA 367

Query: 360 VVLNEGREI-TLDMLPP-----PLNQMSAPINRALPLAHENKVSVHEIFP-LWMTEKQAI 412
           + + +G  I   D++ P     P ++ +AP   + P A  +  +   +   +   E+ AI
Sbjct: 368 MAMCDGSTIEAADLMLPQRSARPSHEPAAPGQPSAPAAAASTGADGGLDDYISNLERTAI 427

Query: 413 EQAIEACDGNIPRAATYLDVSPSTIYRKLQ 442
            +A+E    N   AA  L ++   +  KL+
Sbjct: 428 VKALEESRYNKTAAARKLGITFRALRYKLK 457