Pairwise Alignments

Query, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., Regulatory protein AtoC from Xanthobacter sp. DMC5

 Score =  296 bits (757), Expect = 1e-84
 Identities = 156/371 (42%), Positives = 228/371 (61%), Gaps = 7/371 (1%)

Query: 1   MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLY 60
           +V+D      +  + L     +     T   A+     +  DL+L DLR+PD  G D+L 
Sbjct: 10  IVDDEVRHGEVLEAALAERGFEAVSTNTVAKALAYCASQPVDLVLSDLRMPDRGGADLLR 69

Query: 61  AVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIR------K 114
           A+K + P++P++ MTA+ S+  AV+ ++ GA D++ KP + D +  T+  A+R      +
Sbjct: 70  ALKHEQPELPVIIMTAYASVRGAVDLVKDGAFDYVAKPLDLDDVVATIARALRLKAVESE 129

Query: 115 ASKLKNDVDNKNQNYQGFIGSSQTMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIH 174
            S+L+++++ + + +   +G S     V R +   A S+AS+ + GESGTGKE+ A AIH
Sbjct: 130 NSRLRSELEERYR-FDNLLGESAVFHHVLRQVTEVAPSRASVLLLGESGTGKELVARAIH 188

Query: 175 AASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELC 234
             S R D PF+A+NCAAIP+ LIESELFGHVKGAFTGA   R+G   AA+ GTLFLDE+ 
Sbjct: 189 YNSPRRDLPFVAVNCAAIPETLIESELFGHVKGAFTGATGVREGRFAAANQGTLFLDEIA 248

Query: 235 EMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLY 294
           +M L +Q K+LR +Q  +F+ VGSSK  SVDVR + AT++D  KE+  G FR DLYYRL 
Sbjct: 249 DMPLPVQAKVLRALQEQSFEPVGSSKSVSVDVRIIAATHKDLQKEIAAGTFRMDLYYRLA 308

Query: 295 VIPLHLPPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYEWPGNVRQLQN 354
           V P+ LPPLR R DD++ +A   L   +++ GK    L+ E      +Y WPGNVR+LQN
Sbjct: 309 VFPITLPPLRERTDDIVLLADHFLAAATRDMGKRVKGLTPEAQAMLTRYRWPGNVRELQN 368

Query: 355 VLRNVVVLNEG 365
            +    ++  G
Sbjct: 369 CMERAAIVARG 379